Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0601 ATGGGTAAGGACTACTGGTATTGGGGTAGTGGAAGTGGAAAATCCTCCAAGAGAGGTGGAGGTGGAGCAACAACTCAAACACAAATCCCTTCTGGTTGCATGTGTGCATTCTTTCAAGCCTTTGATTTTCATCCCTTTCACTTCTCCACAAATCCCCAACAACAACAACAACCCTCTGGGATCCCAAATCACCACAACACTGTCCCAAAAGGAGCTGAAGCTCCTAGGAACAGCTTGGAATCAGAAGATGGTACAGTCACATCCATCTCAAAAGAAGAAAATTTCAAAATCCCAAAAATCAGAACAAGTGGAAGCACCAGAGGAAGTTTTAGTGATTTCTCCTCAGAAATCAGCATCTCCTCCCCAGGGACCAAGACACCAACTTTGGTAGCAAGATTAATGGGACTTGATCTTCTTCCTGATTCACATTCCTCATCTTCCTCTTCTTCTTCATGTCTTTCCACTCCAAATCCCCATTACCACCAGAACAGAACACGCCAACACATTCAAATAATCAAACACAGAAACAGCACAGACAATGTTTCCACCCGCTCCTTGCCTGAGACTCCTAGAATCTCATCTGCAAGAAGATCAGATGTTGTTGAGCATAGACTATCTCTCCAAATCAACAAAGAGAACATGGGGCTTGGTGAGGATTTGGAGGGTCCTAGATTTTCATTCTCAAAAAGGAAATATGATGAGAACAGTAGTAGAAGTCCAAGCCACTATGCCAGGCAAATAGTGAAACAGGTTAAGGAAAGTGTGAGCAGGAAAGTTGGGCTTGACATCACCAACACTGTCAAAAACAGAGAACAAGGAAGAGAAGATGTTGTGAACCAATCCAAATTCAAGAAACCTACCAAGATATCAGTGAAACCACTAGATGAAACCAGTCCAGGAAAGCACTCAAACCAATCTTACTCCCCAAGACCAAGCAGATTCATGGACACCAAGCACAAACCAAACACAACAAAACCATCACCAATTGCTCCAAATTACCAAAACACAAAACCATCACCTTCACCTCCACCTATGGTCAACATTGAAGCAGAGCTTTCAAGAGTTTTAACTAAGCCAAAGCCTCAAGCATTGCTTCAGAAGGAGTTGAATAACCCAAAATCAGTCCAAAAGCACAAAAAACCCACCCAAATCAGAAACAAGCCTCCACAGACATCAATCAGAAACAAGCAAGAAGAGTCATTCATTACCCGATCTCCATCAAACACCAGAGCCAATGACATCAAAACCAAAAGCAAGAGAACTCATCCACTTTCAACCAATCTTCTCAATAACCTCAATAGTACTGTCCCAAATCTTCTCTCTGTCAAGTCAAACCCTTCTCCTCCAACAATCAAAATTCCTCAAATACAGGTAAAAACTCAGACACAAGAATCTGATGACATCCAAGAAGCAAAAAGCAGCACACAGTTATTTAGTTCTTTGCGCCAGAGTACACTCTGCACCCGAGGAAGAACAAACGATGAGGACAAAGCTAACGGTGTCTACACGGCAACCGGAGCTGGCGATGAAGGACCTGAGTATCAGTACATCACAACCCTTCTCAGCCGTACAGGGGTACACAAAGCCACGTCACTACCCCACCACCATTTTCAATGGTTCTCTTCAACACACCCATTGGACCCTTTACTTTTCCACCGTCTTGAACAACACTACCCATTATCCAACTCCTTCGCTTCTTCCATTGAAAGCTATAGAGATTGCAAGTTTAGGCAGAAAAACCATCTGGGTCCACGTTGCAACCGGAGGTTAATGTTTGATTTGGTGGATGAGTTGCTTTCAGAGATTCTGGTGAGGCCAAAGGGGAAGGGACAGGGTAAGAGTCACCGTGGGTTGTTGTTGGAGACGGTGTGGAAGAGGGTTCGGAGCTTCCCACGTGCGAAATGCGAGGTTCTGGAGGATATTGATGGGTTGATAGAGTTGGAGGACGTGCAGGAGAAGATGAAGGAAGAAGGAGAAGAAGGGTTGGTGAAGGAGATTGAAGGGAAGATATTGGAGATGTTGGTGCATGAAACGTTAAACGTTATGGTTGGTGGTGGTAGTGGTGGTGGTCGTGGTGGTGGGAAGGGGGAGACATGA 2097 0.4449 MGKDYWYWGSGSGKSSKRGGGGATTQTQIPSGCMCAFFQAFDFHPFHFSTNPQQQQQPSGIPNHHNTVPKGAEAPRNSLESEDGTVTSISKEENFKIPKIRTSGSTRGSFSDFSSEISISSPGTKTPTLVARLMGLDLLPDSHSSSSSSSSCLSTPNPHYHQNRTRQHIQIIKHRNSTDNVSTRSLPETPRISSARRSDVVEHRLSLQINKENMGLGEDLEGPRFSFSKRKYDENSSRSPSHYARQIVKQVKESVSRKVGLDITNTVKNREQGREDVVNQSKFKKPTKISVKPLDETSPGKHSNQSYSPRPSRFMDTKHKPNTTKPSPIAPNYQNTKPSPSPPPMVNIEAELSRVLTKPKPQALLQKELNNPKSVQKHKKPTQIRNKPPQTSIRNKQEESFITRSPSNTRANDIKTKSKRTHPLSTNLLNNLNSTVPNLLSVKSNPSPPTIKIPQIQVKTQTQESDDIQEAKSSTQLFSSLRQSTLCTRGRTNDEDKANGVYTATGAGDEGPEYQYITTLLSRTGVHKATSLPHHHFQWFSSTHPLDPLLFHRLEQHYPLSNSFASSIESYRDCKFRQKNHLGPRCNRRLMFDLVDELLSEILVRPKGKGQGKSHRGLLLETVWKRVRSFPRAKCEVLEDIDGLIELEDVQEKMKEEGEEGLVKEIEGKILEMLVHETLNVMVGGGSGGGRGGGKGET* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0601 698 MobiDBLite consensus disorder prediction 48 64 - -
Lja5g0601 698 MobiDBLite consensus disorder prediction 177 199 - -
Lja5g0601 698 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 686 - -
Lja5g0601 698 MobiDBLite consensus disorder prediction 367 416 - -
Lja5g0601 698 MobiDBLite consensus disorder prediction 177 192 - -
Lja5g0601 698 MobiDBLite consensus disorder prediction 103 122 - -
Lja5g0601 698 MobiDBLite consensus disorder prediction 141 161 - -
Lja5g0601 698 Pfam Domain of unknown function (DUF4378) 513 677 IPR025486 -
Lja5g0601 698 MobiDBLite consensus disorder prediction 48 92 - -
Lja5g0601 698 MobiDBLite consensus disorder prediction 297 312 - -
Lja5g0601 698 MobiDBLite consensus disorder prediction 271 346 - -
Lja5g0601 698 MobiDBLite consensus disorder prediction 385 412 - -
Lja5g0601 698 Pfam DUF761-associated sequence motif 114 145 IPR032795 -
Lja5g0601 698 PANTHER DUF4378 DOMAIN PROTEIN 1 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0601 Lja-Chr5 5383343 5386006 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0601 99 678 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 34.713 2.74e-52 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0601 - - gmx:102659931 736.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0601 5 5383343 5386006 Lja5g0601 5 5383343 5386006 ECH