Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0586 ATGCCATCACGGCAGCTCTCCACGTCAGCACCACCTCACAAGGCGAACCACCACGGTGGTGGATTCTTCTCCGCGTGCCCTCTCGTCCTTCTACTCCTTCTCTGCCTCCGCAAGCGGAAAAAGCGCACCACCCCTTCCTCCGACACCGACTCCAACCCCCCTCACCCCTTCCCCTACCCCCTCCTCCGCTGCGCCACCAACTCCTTCTCCACCCTCCTCGGCCACGGCGGCTTTGGCCCAGTCTTCTCCGGCTCCCTCTCCGGCAAACCCGTCGCTGTCAAGCTCATGGACCCCACCACTGCCACCCTCCAGGGCGAGCTCCAGTTCCACAACGAGCTCTTCTTCGCGTCCACTCTCCGCTCCCACCTCGTGGTCCCCCCAATCGGCTTCTCCTCCGACCCCAAACGCCGTCGTTTCCTCCTCGTGTACGACCTCATGCACAACGGCAACCTTCACGACGCGCTTCTCCGCCGCAAGTGCCCTGAGCTTGCCTTGTGGAACAAGCGCTTCTCAATAGCCGTTGACGTTGCAAAAGGGCTTCACTACCTTCACTCACGCGACCCGCCGGTTATCCACGGCGACATCAAGCCCAGTAACATTCTCCTTGACCGTTTTTTCTCCGCTAAGATCGCCGATTTCGGTCTAGCCCGGTTGAAATCTGAACCCCAGTTTGTGGAAACTGGTAACAATAGAAGGGAAGACTTGGAGAGTGATGGTGGGTCGCTGGTTGGGGAAACTGAGAGTGTTGATGCTGGGCTTGAGGATCGGAGTTTTGAGGTTGAGGGAGATAGTGGTGGTGGTAAGGGGATGAATCAGAGTGGGGGAGTGAAGGATTATGTGATGGATTGGATTGGACAGGAGGTGAATGATGAAATGCCTAAGAGGGAATGTGTAAGTGGTGGTGCTGGGTCTAGCAGTGGGAATGGAGTGGTGGAGAAGGGAAAGATCAGGGGGAAGAAATTGGAGTGGTGGGAATCAATGGATGAGGAAAAGGGTGGTGGTGGTGATTTTGGAGTTTTGAAGAAGGAGAAGAGAAGGCCTGTGAGGGAATGGTGGAAGGATGAGTATTCTGAAGAGCTTTCAAAGAAGAAAAAGAAGAAGGAAAAGAAGAAAGGTAGAAATAATGATGATGATTGGTGGGAGAGAGATGATGCTTTGTATAGTGATGTAAAAAAGAGTAGTAAAAGCCGTAGCAGGAGAAGTCGTGGCAGTGTAGATTCATGGTTCAGTGGGGAATTGAAGAGAGCTAGATGGAACAGCTATGATTCTGCTGGGAGTGGAGAGATACCAAAGAGTGGTGGTATTAGCACTACTCCAAGCATGAGGGGAACACTTTTTTATGTTGCTCCTGAGTTTGGCCACAATGGGGGTGTATCAGAGAAATGTGATGTGTATAGTTTTGGGGTTCTATTGCTTGTGATTGTTTCTGGGAGGCGGCCGCTGCAGGTGGTGGCTGGTTCGCCCTTATCGGAGTTTCAGCGAGCGAATTTGGTGTCTTGGGCTCGCCATTGTGGCCGCAAAGGAAAGCTTCTTGACTTGGTAGATCAGTCTGTTCAGTCATTGGATAAAGAGCAGGCTCTTATTTGCATCAAGGTTGCACTGCTTTGTTTGCTCAAGTCACCTCATCTTCGTCCTTCAATGAAAGAGGTTGTGGGAATGCTTTGTGGGGAGTTGGAGCCACCCCAATTGCAGCACTCACAATCTCACTTCTCATTCAAGTCTAGGAAGCCAGGCCAGTGA 1740 0.5241 MPSRQLSTSAPPHKANHHGGGFFSACPLVLLLLLCLRKRKKRTTPSSDTDSNPPHPFPYPLLRCATNSFSTLLGHGGFGPVFSGSLSGKPVAVKLMDPTTATLQGELQFHNELFFASTLRSHLVVPPIGFSSDPKRRRFLLVYDLMHNGNLHDALLRRKCPELALWNKRFSIAVDVAKGLHYLHSRDPPVIHGDIKPSNILLDRFFSAKIADFGLARLKSEPQFVETGNNRREDLESDGGSLVGETESVDAGLEDRSFEVEGDSGGGKGMNQSGGVKDYVMDWIGQEVNDEMPKRECVSGGAGSSSGNGVVEKGKIRGKKLEWWESMDEEKGGGGDFGVLKKEKRRPVREWWKDEYSEELSKKKKKKEKKKGRNNDDDWWERDDALYSDVKKSSKSRSRRSRGSVDSWFSGELKRARWNSYDSAGSGEIPKSGGISTTPSMRGTLFYVAPEFGHNGGVSEKCDVYSFGVLLLVIVSGRRPLQVVAGSPLSEFQRANLVSWARHCGRKGKLLDLVDQSVQSLDKEQALICIKVALLCLLKSPHLRPSMKEVVGMLCGELEPPQLQHSQSHFSFKSRKPGQ* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0586 579 SMART serkin_6 67 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g0586 579 Pfam Protein tyrosine and serine/threonine kinase 70 222 IPR001245 GO:0004672|GO:0006468
Lja5g0586 579 Gene3D Transferase(Phosphotransferase) domain 1 59 241 - -
Lja5g0586 579 Gene3D Transferase(Phosphotransferase) domain 1 418 572 - -
Lja5g0586 579 ProSiteProfiles Protein kinase domain profile. 67 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g0586 579 PANTHER OS07G0586332 PROTEIN 1 577 IPR044576 -
Lja5g0586 579 SUPERFAMILY Protein kinase-like (PK-like) 52 567 IPR011009 -
Lja5g0586 579 Coils Coil 353 373 - -
Lja5g0586 579 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Lja5g0586 579 MobiDBLite consensus disorder prediction 227 248 - -
Lja5g0586 579 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Lja5g0586 579 PANTHER RECEPTOR-LIKE SERINE/THREONINE-KINASE PLANT 1 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0586 Lja-Chr5 5233701 5235931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0586 431 554 Receptor kinase-like Gene Family AT3G58690 32.308 6.12e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Lja5g0586 PK_Tyr_Ser-Thr 1.8e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0586 - - lja:Lj5g3v2030870.1 928.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0586 5 5233701 5235931 Lja5g0586 5 5233701 5235931 ECH