Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0585 ATGACTCTGAGTTCATTCACTCCAATGGAAAAGATGAGTTGCATTCTAGCAATGTATCTCCTCTTCTTGAGTATAACCTTATCAGCAAATGCTCAATTTCTCAAGAAGACTTACATCATTCAAATGGACAACTCAGCAATGCCAGCAGGTACCTTCTCTACTCACCTTGAATGGTATTCATCAAAAGTGAAATCAGTGCTGTCCAAATCACTAGAATCTGAGACAATTTCCAGTGAAGAAGAAGAAGAGAGAATCATTTACAGTTACCACACTGCTTTCCATGGTGTGGCTGCAAAACTGACCCCAGAAGAAGCTCAGAAGCTAGAGTCACAAGAAGGTGTTGTGGCCATTTTCCCAGAGACAAGGTACCAGCTACACACCACAAGAAGCCCAACTTTCCTTGGGCTTGAAAAAATGCAAAGCACTGAAATCTGGTCAGAAAAGCTTTCCAACCATGATGTTGTGGTGGGAGTGTTGGACACTGGGATCTGGCCAGAGAGTCAGAGCTTCAATGACACAGGTTTCAAACCAGTACCTTCTCACTGGAAAGGTGCATGTGAGACAGGAAGAGGATTCAGAAAACACCACTGCAATAACAAGATTGTAGGGGCAAGAATCTTCTACCATGGATATGAAGCAGCATCAGGTAGAATTGATGAGAAATCAGAATACAAATCACCAAGGGACCAAGATGGGCATGGAACTCACACTGCAGCAACAGTTGCTGGATCCCCAGTGCATGGTGCTAATCTTCTTGGCTATGCCCATGGCACAGCAAGAGGAATGGCACCAGGTGCAAGAATTGCAGCTTACAAAGTTTGCTGGAGTGGTGGATGCTTCAGCTCAGATATTCTCTCAGCTGTTGATAGAGCAGTTGCTGATGGTGTCAATGTTCTTTCCATCTCCTTAGGTGGTGGAGTTTCATCTTACTACCATGATAGTTTATCTGTAGGAGCATTTGGAGCAATGGAAAAAGGTGTTTTTGTTTCATGTTCTGCTGGGAATGCAGGGCCTGACCCTGTTAGTCTTACAAATGTGTCACCTTGGATCACCACAGTTGGAGCCAGCACAATGGATAGGGATTTCCCAGCAGAAATTCACCTGGGAAATGGAAGAAAGTTCACTGGAACTTCACTCTACAAAGGAAGAACCATGCTCTCAGTTAAGAAACAATACCCTTTGGTCTACATGGGGAGTAATTCAAGCAGCCCTGACCCAAATTCTTTGTGCTTGGAAGGTACTTTGGATCGTCACAAAGTTGCAGGAAAAATTGTGATATGTGACAGAGGAATTAGCCCAAGGGTGCAAAAGGGTCAGGTGGTGAGAAATGCAGGTGGTGTGGGAATGATTCTCACAAACACTGCAGTCAATGGAGAAGAGCTTGTTGCTGATTGTCACCTCCTTCCAGCAGTTGCAATTGGAGAGAAAGAAGGTAAAGACCTCAAAAGCTATGTGTTGAGGACTAGAAAAGCCACTGCAACTTTATCATTTCTTGAAACAAGATTGGGAATTAGACCATCACCTGTTGTGGCAGCATTTTCATCAAGAGGGCCTAATTTTCTTTCTCTTGAGATTCTCAAACCTGATATGGTTGCTCCTGGTGTGAACATTCTTGCTGCTTGGAGTGGTGCCATAGGTCCTTCAAGTCTTCCAACAGATCATAGGAGGGTGAAGTTCAACATCCTCTCAGGAACTTCAATGTCATGTCCTCATGTTAGCGGCGTCGCTGCTTGGCTTAAAGCGAAGCATCCGAATTGGAGTCCTGCTGCTATCAAATCCGCGTTGATGACAACAGCTTATGTTCATGACAACACCATCAACCCTCTGAGGGATGCATCTAGTCCTGAACCTTCAACTCCTTATGATCATGGTGCTGGACACATTAATCCAAAAAAAGCTCTTGATCCAGGTTTTGTCTATGATATTGCACCTCAGGAGTATTTTGATTTTCTCTGCATACAGAAGCTAACTCCTTCACAAGTTCAAGTTTTTGCCAAACATTCAAACAGAACTTGCAAGCACACTCTTGCAAGTGCAGGGGACTTGAACTACCCAGCTATTTCAGTTGTGTTTCCTCAGAAAGCTTCCATTTCAGTTTTGACTGTTCACAGAACCGCCACCAATGTTGGACCTGCAGTATCCAAATACCATGTCAATGTTTCTCCATTTAAAGGTGCTTCTGTCAAAGTTGAGCCAGACACATTGAACTTCACTAGGAAATATCAGAAACTGGCTTACAAGGTTACCTTCACAGTGAAAACTCGGCAAATAGAACCAGAATTTGGAGGCCTGGTTTGGAAGGATGGTGTGCACAAAGTGAGAAGCCCCATTGTAATAACATATCTGCCACCAATGTGA 2358 0.4385 MTLSSFTPMEKMSCILAMYLLFLSITLSANAQFLKKTYIIQMDNSAMPAGTFSTHLEWYSSKVKSVLSKSLESETISSEEEEERIIYSYHTAFHGVAAKLTPEEAQKLESQEGVVAIFPETRYQLHTTRSPTFLGLEKMQSTEIWSEKLSNHDVVVGVLDTGIWPESQSFNDTGFKPVPSHWKGACETGRGFRKHHCNNKIVGARIFYHGYEAASGRIDEKSEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAHGTARGMAPGARIAAYKVCWSGGCFSSDILSAVDRAVADGVNVLSISLGGGVSSYYHDSLSVGAFGAMEKGVFVSCSAGNAGPDPVSLTNVSPWITTVGASTMDRDFPAEIHLGNGRKFTGTSLYKGRTMLSVKKQYPLVYMGSNSSSPDPNSLCLEGTLDRHKVAGKIVICDRGISPRVQKGQVVRNAGGVGMILTNTAVNGEELVADCHLLPAVAIGEKEGKDLKSYVLRTRKATATLSFLETRLGIRPSPVVAAFSSRGPNFLSLEILKPDMVAPGVNILAAWSGAIGPSSLPTDHRRVKFNILSGTSMSCPHVSGVAAWLKAKHPNWSPAAIKSALMTTAYVHDNTINPLRDASSPEPSTPYDHGAGHINPKKALDPGFVYDIAPQEYFDFLCIQKLTPSQVQVFAKHSNRTCKHTLASAGDLNYPAISVVFPQKASISVLTVHRTATNVGPAVSKYHVNVSPFKGASVKVEPDTLNFTRKYQKLAYKVTFTVKTRQIEPEFGGLVWKDGVHKVRSPIVITYLPPM* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0585 785 ProSiteProfiles Serine proteases, subtilase domain profile. 122 634 - -
Lja5g0585 785 Gene3D - 359 502 - -
Lja5g0585 785 MobiDBLite consensus disorder prediction 219 241 - -
Lja5g0585 785 Gene3D - 651 782 - -
Lja5g0585 785 PANTHER XYLEM SERINE PROTEINASE 1 27 779 - -
Lja5g0585 785 Pfam Subtilase family 152 605 IPR000209 GO:0006508|GO:0008236
Lja5g0585 785 CDD PA_subtilisin_like 366 495 - -
Lja5g0585 785 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 25 126 IPR037045 -
Lja5g0585 785 Pfam PA domain 391 481 IPR003137 -
Lja5g0585 785 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 779 IPR045051 -
Lja5g0585 785 Pfam Fibronectin type-III domain 681 779 IPR041469 -
Lja5g0585 785 CDD Peptidases_S8_3 123 600 IPR034197 -
Lja5g0585 785 PRINTS Subtilisin serine protease family (S8) signature 563 579 IPR015500 -
Lja5g0585 785 PRINTS Subtilisin serine protease family (S8) signature 151 170 IPR015500 -
Lja5g0585 785 PRINTS Subtilisin serine protease family (S8) signature 229 242 IPR015500 -
Lja5g0585 785 SUPERFAMILY Subtilisin-like 125 637 IPR036852 GO:0004252|GO:0006508
Lja5g0585 785 ProSitePatterns Serine proteases, subtilase family, serine active site. 564 574 IPR023828 -
Lja5g0585 785 Gene3D Peptidase S8/S53 domain 153 647 IPR036852 GO:0004252|GO:0006508
Lja5g0585 785 Pfam Peptidase inhibitor I9 37 126 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0585 Lja-Chr5 5219967 5222847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0585 3 785 Subtilisin-like Serine Gene Family AT5G51750 69.338 0.0 1149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0585 - - gmx:102661592 1305.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0585 5 5219967 5222847 Lja5g0585 5 5219967 5222847 ECH