Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0501 ATGTATGTCAGACACAGACAGCAACCCATTACCCCACGAGGAGAATACGTCCCAGAGCTCAGCTACTGGATCCGCTTCCACAGCGACGGCACGGCGGAACGCCTCAGAAACACACCATTCGCGCCACCGTCACTCAACGACCCCAAAACTGGAGTCTCCTCCAAAGATATAATCATCTCACATAACCCCCCAATCTCTGCACGCATTTACCTTCCAAACCTCACCACCAACTCCAGCAAACTTCCCATCTTAGTCTATTATCACGGCGGTGGATTCTTCTTTGAATCTGCTTTCTCTGAAATCTTCCATAACCATCTCACCAAGCTGGTTTCTACAGCAAACGTCTTGGTCGTTTCTGTAGAATACAGGCTTGCTCCGGAGACTCCTCTCCCTGCAGCATACGATGATTCCTGGGCTGCTCTCAAATGGGTCGCTTCCCATTCCACCAAAGACACTGTAGCAGAGCCATGGTTGACTGAGCATGGTGACTTCAACAGAGTTTTCATCGGAGGTGACAGTGCAGGCGGCAACATTGTGCATAACATCATTTCCACTCATGGTTCTGAGGATTTACCTGGTAATGTTAAAATCTATGGTGCTGTTTTGATCCAGCCTTACTTCTATGGTTCAGAGCCTGCTGGATCAGAATCTGCTACAGGGCGCGAAGCGAATTTCTATAATAGTGTTTGGAAGTTGGTGTACCCATCTGCACCTGGTGAAATTGATAGTCCTTTCATGAACCCTTTGGCTCCAGGTGCACCTAGCTTGGATAAACTTGCATGTTCTCGAATGATTGTGTGTGTTGCTGAGAAAGATGGGATGAGGAACAAAGTGGTTTTGTATTGTGAGGCAGTGAAGAAGAGTGGGTGGAAGGGGAAGATTGAACTCTTTGAAGAGAAGGAATAA 906 0.4757 MYVRHRQQPITPRGEYVPELSYWIRFHSDGTAERLRNTPFAPPSLNDPKTGVSSKDIIISHNPPISARIYLPNLTTNSSKLPILVYYHGGGFFFESAFSEIFHNHLTKLVSTANVLVVSVEYRLAPETPLPAAYDDSWAALKWVASHSTKDTVAEPWLTEHGDFNRVFIGGDSAGGNIVHNIISTHGSEDLPGNVKIYGAVLIQPYFYGSEPAGSESATGREANFYNSVWKLVYPSAPGEIDSPFMNPLAPGAPSLDKLACSRMIVCVAEKDGMRNKVVLYCEAVKKSGWKGKIELFEEKE* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0501 301 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE 12 301 - -
Lja5g0501 301 SUPERFAMILY alpha/beta-Hydrolases 9 298 IPR029058 -
Lja5g0501 301 Pfam alpha/beta hydrolase fold 84 296 IPR013094 GO:0016787
Lja5g0501 301 Gene3D alpha/beta hydrolase 21 301 IPR029058 -
Lja5g0501 301 PANTHER ARYLACETAMIDE DEACETYLASE 12 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0501 Lja-Chr5 4372493 4374843 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0501 23 292 Carbohydrate Esterase AT1G49640 40.942 1.75e-68 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0501 - K13258 gmx:111043202 400.208