Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0459 ATGGGTGAAAGGGTGGTAGTGAGGAGACAGATTGGAAGGAAGGGAAGTACGGCGAGAACATGGCTGGTGATTGGTGGAGACGGCCAGAGAGAGGAGATGGAGGCTGGAAAGCAGGTCATTCTGCGGCGGACGGGGCTATCTGCTCGGGACCTGCGGATTCTGGACCCATTGCTGTCACACCCTTCTGCCATAATGGGACGTGAGAGAGCAATGGTGATCAACTTGGAGCATGTCAAGGCTATTATCACTGCACAACAAGTTCTCTTGCTCAATTCCAGGGACCCCTCTGTCATCCCTTTTGTTGATGAACTTCATGCTCGGATTCTTCATCACCACCATGCCTGCACTCAATCTCTTAGTACTCATTCACAGGGGGGTGGAGATGGGGAGGGTGAAGCTGAAATACAGGAAGATAGCAGCACGAAGATTCTACCATTTGAGTTCGTAGCACTGGAGGCATGCATTGAGTCTGTTTGTAGCGCCTTAGAAAATGAGACACAAATATTGGAGCAAGAGGCTCATAATGCCTTAGATAAACTGACTACAAAGATCAGTACTCTTAATTTGGAATACGTTCGTCAAATTAAGAGCCGCTTAGTTGCCTTAACTTCCCGTGCTCAAAGGGTAAAGGATGAAATAGAGAACTTGTTGGATGATGATGACGATATGGCTGAGCTGTTTCTCACAGACAAGTTAGCTCAACACCATTATCCGAATTCTTCTGTCTCATCCATCAATAACGCCGACGACGTGGAGAATCTTCAAGTTCCTCAACCAGATATAAATGACAGAATTCCTCCTGAAATATCATTGGAACGTGGTGGAGATTCTACAAGTGATCATGAAGATGAACAAAATGGTGCTGATGAGTACTCGAGCGGCCAAATATTTGGTGCTGGTAGCGAAATCCATGAAAGCCAGGCCGGCAATACCAACAGTGCTTCTGTGAGCAATAAGAACCGGAATGTGGAGGATCTTGAAATGCTGTTGGGAGCATACTTTGTGCAAATCGGTGGCACAGTCAACAAATTATCTGCGCTGGCGGAGTACGTTGGTGACACAGAAGACTACATAAATATAAACCTGGATGACAAGCAGAACCGAATCCTGGAAACAGGAGTGAAGGTTGGGACAGCAAGTGTGCTTCTGAATGCCTTTATTGTAGTGACAGGTGTTTTGGGCATGAACATTCACATTAAGCTATTTGAAACTGGGCTTCCGCAGTTCCTCTCCGTAGTCTTTGGATGCACCGCTGCTTGCATATTCTTGTATGTCGTTGCCATGGCTTGGTACAAGCATAAGCGCTTGCTGGAATAG 1317 0.4655 MGERVVVRRQIGRKGSTARTWLVIGGDGQREEMEAGKQVILRRTGLSARDLRILDPLLSHPSAIMGRERAMVINLEHVKAIITAQQVLLLNSRDPSVIPFVDELHARILHHHHACTQSLSTHSQGGGDGEGEAEIQEDSSTKILPFEFVALEACIESVCSALENETQILEQEAHNALDKLTTKISTLNLEYVRQIKSRLVALTSRAQRVKDEIENLLDDDDDMAELFLTDKLAQHHYPNSSVSSINNADDVENLQVPQPDINDRIPPEISLERGGDSTSDHEDEQNGADEYSSGQIFGAGSEIHESQAGNTNSASVSNKNRNVEDLEMLLGAYFVQIGGTVNKLSALAEYVGDTEDYININLDDKQNRILETGVKVGTASVLLNAFIVVTGVLGMNIHIKLFETGLPQFLSVVFGCTAACIFLYVVAMAWYKHKRLLE* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0459 438 PANTHER MAGNESIUM TRANSPORTER MRS2-3 14 438 - -
Lja5g0459 438 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 14 438 IPR039204 -
Lja5g0459 438 MobiDBLite consensus disorder prediction 257 295 - -
Lja5g0459 438 Gene3D - 4 92 - -
Lja5g0459 438 Coils Coil 159 179 - -
Lja5g0459 438 CDD Mrs2_Mfm1p-like 21 436 IPR039204 -
Lja5g0459 438 MobiDBLite consensus disorder prediction 266 288 - -
Lja5g0459 438 Coils Coil 192 219 - -
Lja5g0459 438 Gene3D Magnesium transport protein CorA, transmembrane region 100 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0459 Lja-Chr5 4016852 4020998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0459 20 438 MRS2 Gene Family AT3G19640 53.125 1.63e-146 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0459 - - aprc:113872466 503.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0459 5 4016852 4020998 Lja5g0459 5 4016852 4020998 ECH