Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0393 ATGGCTTCTTCGCTTTCAATCGGGACACACTTGTCCAACTTTCAACATCTGCGGAATCCTAGAATTCCACTTCATGGTCTTTGCCCTGTTGATTATTCGCCGTCATCTCAATCTCAACCCCTTTTTGCTGGAATCAGATTTCGAGCTTCCTCTCCCAGGTTGCTTCGTACTGTTGTATTGGCACGCGCAGAAGATAAGGCTAGAGCTCCTACACCTTCTTCGTTTCAGTCTCAGCAAAATTCCCAGGAACAGTTCCAGGACATGACGCCAGAATCTGGAAATTGTGATCCTCTATGTTCGGTTGATGAAACAAGCTCAGAAGATTTTGAAGGCAACTACCAGCCTAAGACTGATTTGCTCAAAGCGGTTGCGATATTAGCAGCAGCTGCAACTGGGGCTGTGGCAATTAACCATTCTTGGGTGGCAGCTAATCAGGATCTTGCAATGGCATTGCTATTTGTGATAGGATATGCAGGCATCATATTTGAAGAATCTCTAGCGTTTAATAAAAGCGGAGTGGGATTGTTGATGGCTGTTAGCTTATGGGTGATACGGAGTATTGGGGCTCCGTCAACGGATATAGCTGTTTCAGAGCTAACACATGCATCTGCGGAAGTCAGCGAAATAGTGTTTTTCTTGCTTGGTGCAATGACCATTGTTGAGATAGTTGATGCTCATCAAGGATTCAAGCTAGTTACTGACAATATAAAAACCCGAAACCCACGCCTTCTGCTCTGGGTGGTTGGATTTGTTACATTTTTTCTCAGTTCAATTCTAGACAACCTGACATCCACCATAGTCATGGTTTCTCTTTTGCGGAAATTAGTACCTCCATCAGAGTATCGAAAGATTCTTGGAGGTGTTGTTGTAATAGCAGCAAATGCTGGAGGTGCATGGACTCCTATTGGTGATGTTACTACTACCATGCTATGGATACATGGTCAAATATCTACATTACCAACAATGAAGGATTTATTTATACCTTCAGCCATTTCCCTTGCTGTTCCCCTGGCTCTAATGTCCCTGACTAGTGAAGTTAGTGGGAAGGGCAGTGATTCTCCCAATGTCTTGGCATCTGAACAGATGGCTCCTCGAGGACAGCTTGTTTTCTCAGTTGGTTTAGGAGCTTTGATTTTTGTCCCAGTTTTCAAGGCCCTCACCGGATTGCCTCCGTTCATGGGGATGCTGCTTGGTCTTGGTGTGCTTTGGATCCTCACTGATGCTATCCATTACGGCGAATCGGAAAGGCAGAAGCTAAAAGTTCCACAGGCTCTGTCAAGGATAGACACTCAAGGAGCACTGTTCTTCCTGGGAATTCTTTTATCCGTTAGCAGTCTGGAGGCAGCGGGGATTCTTCGAGAAATAGCAAATTACCTTGATTCTCATGTCCCGAATAGCGAACTGATTGCAAGTGCTATTGGAGTCATATCTGCAATAATAGACAATGTTCCCCTGGTTGCTGCAGCAATGGGAATGTATGACGTCACTGCTTTCCCTCAAGATTCTGAGTTCTGGCAATTAGTTGCATTTTGTGCTGGTACTGGTGGATCCATGTTGGTTATTGGCTCAGCTGCTGGAGTTGCATTCATGGGAATGGAAAAGGTGGACTTCTTTTGGTACTTTCGAAAGATTAGTGGCTTTGCTTTTGCTGGTTACGCCACTGGTATTGCTGCCTATTTAGCGTTTCATAACCTCAACGTTTCTCTACCGACAACTCTAGCCGAAGTTCCTTTCCTTTCTGGTTCATAA 1749 0.4477 MASSLSIGTHLSNFQHLRNPRIPLHGLCPVDYSPSSQSQPLFAGIRFRASSPRLLRTVVLARAEDKARAPTPSSFQSQQNSQEQFQDMTPESGNCDPLCSVDETSSEDFEGNYQPKTDLLKAVAILAAAATGAVAINHSWVAANQDLAMALLFVIGYAGIIFEESLAFNKSGVGLLMAVSLWVIRSIGAPSTDIAVSELTHASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNIKTRNPRLLLWVVGFVTFFLSSILDNLTSTIVMVSLLRKLVPPSEYRKILGGVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTMKDLFIPSAISLAVPLALMSLTSEVSGKGSDSPNVLASEQMAPRGQLVFSVGLGALIFVPVFKALTGLPPFMGMLLGLGVLWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGILREIANYLDSHVPNSELIASAIGVISAIIDNVPLVAAAMGMYDVTAFPQDSEFWQLVAFCAGTGGSMLVIGSAAGVAFMGMEKVDFFWYFRKISGFAFAGYATGIAAYLAFHNLNVSLPTTLAEVPFLSGS* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0393 582 MobiDBLite consensus disorder prediction 70 94 - -
Lja5g0393 582 Pfam Citrate transporter 158 513 IPR004680 GO:0016021|GO:0055085
Lja5g0393 582 PANTHER BNAC03G40960D PROTEIN 50 582 - -
Lja5g0393 582 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 50 582 IPR045016 GO:0006814|GO:0015297
Lja5g0393 582 MobiDBLite consensus disorder prediction 67 94 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0393 7 582 Antiporters AT3G19490 78.125 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0393 - - lja:Lj5g3v2113480.1 1070.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0393 5 3515241 3521704 Lja5g0393 5 3515241 3521704 ECH