Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0390 ATGGATCTATTTACAAGATTTTTTCTTTTACTTTGCATGTGTTTGTTGTCTTCAGCCCGCGATGATATTCTCATGAAAACAACTGTGGTACTGAGAAATTATCTAAGTAATAATGTTGATCTTACCATTCACATTAAATCTAGGGATGATGATCTTGGACAACATGTTCTCCATCATGGTGCCTCTTTTTTATGGACTTTTAAAACCAACTTTTGGGGCACAACACTATACCACGGTACGTTTCAATGGAAAAATATCACTAAAAATTTTGACATATTTGTACAAGAGAGGGATGAACCACGTTGTCAATATTGTGCTTGGGTTATACGAGATAATGGACCATGTTACATAGACCAGCGGCCGTCGTATGATCTACAATGCTACACATGGTAA 393 0.3639 MDLFTRFFLLLCMCLLSSARDDILMKTTVVLRNYLSNNVDLTIHIKSRDDDLGQHVLHHGASFLWTFKTNFWGTTLYHGTFQWKNITKNFDIFVQERDEPRCQYCAWVIRDNGPCYIDQRPSYDLQCYTW* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0390 130 Pfam Plant self-incompatibility protein S1 28 130 IPR010264 -
Lja5g0390 130 PANTHER - 22 124 IPR010264 -
Lja5g0390 130 PANTHER LEGUMINOSIN GROUP486 SECRETED PEPTIDE 22 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0390 Lja-Chr5 3501477 3501869 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0390 26 130 Carbohydrate Esterase AT3G16970 33.945 1.26e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0390 - - lja:Lj3g3v2995840.1 119.398