Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0354 ATGACTCTCCCAATCATGAAACCACTTCTTTTCTCTCTTACAACAGTATCACTTGTTTCAATCACAAAACTCCTATATGCTAATCACTTTCATATACCTTTCCCTCCTCCATCTCTTTCCATTGCTGGTGTCACCATCATCTCTGCTATCATCCTATACTTGTTTTCCAAAAACCACTCTTCTCATCTCCCTCCAGGCCCTCTCTCTATCCCTGTATTTGGCAACTGGCTACAAGTTGGCAATGACCTCACTCACCGTCTCCTAGCATCCATGACAAAAACCTACGGCCCCGTGTTCCTCCTCAAACTTGGTTTCAGAAACTTGGTTGTGGTCTCTGATCCTCAACTCGCCTCCGAAGTCCTCCACTCCAAAGGCGTGGAATTCGGTTCTCGCCCGCGAAATGTAGTGTTTGACATCTTCACAGGGAAAGGCCAAGACATGGTTTTCACCGTGTACGGTGATCACTGGCGAAAAATGCGCAGGATCATGACACTGCCATTCTTCACCAACAAGGTTGTCCAGAATTACAGCAGCATGTGGGAGCAAGAGATGGACCTTGTGGTCCGCGACCTCAATGCCGACCAGACAGTGAGAAGTGAAGGGATAGTTATCAGAAGGCGGCTGCAGTTAACGCTCTACAACATCATGTACAAGATGATGTTTGATACCAAGTTTGAGTCCTTAGAAGACCCTTTGTTCATTCAAGCCACAAAGTTCAACGCTGAGAGAAGCCGTTTAGCACAGAGTTTTGAGTACAATTATGGAGATTTCATCCCATTGCTAAGACCCTTCTTGAGAGGATACCTGAATAAATGCAAGGACTTGCAAGCCTGGAGGTTGGAATTTTTCAACAAGAACTATGTTGAGGATAGAAGAAAAATAATGGCTGCCAATGGGGACAAGCACAAGATAAGCTGCGCTATGGATCATATCATAGAAGCTGAGATGAAGGGAGAAATCAGTGAAGAGAATGTGATTTACATAGTTGAGAACATTAATGTTGCAGCAATAGAGACAACATTGTGGTCCATGGAGTGGGTAATAGCAGAGGTTGTTAATCATCCAATTGTTCAAAGCAAGATACGTGAAGAGATATCAAGTGTGCTTAAAGAGGAGCCAGTGACAGAGTCCAATCTACACAAACTACCATATCTACAAGCCACTGTGAAAGAGGCATTGAGACTTCACACCCCAATTCCTCTGTTGGTGCCACACATGAACCTGGAAGAGGCAAAGCTAGGAGGGTATACAATTCCTAAGGAATCTAAGGTGGTGGTGAATGCTTGGTGGCTTGCAAACAACCCAGCATGGTGGAAGAATCCAGAGGAGTTCAGGCCAGAGAGGTTCTTTGAAGAGGAAAATGGGACAGATGCTGTTGCAGGAGGGAATAAGGTTGATTTTAGATATGTACCCTTTGGTGTTGGGAGGAGGAGTTGCCCTGGGATTATACTTGCATTACCAATATTAGGACTTGTCACTGCAAAGTTGGTGTCAAGTTTTGAGATGAATGCTCCAAATGGGACAAAGGTAGACATGACTGAAAAAGGAGGACAATTTAGCTTGCACCTTGCCAACCACTCAACAGTGTTGTTCCATCCAATTAAATAG 1608 0.4447 MTLPIMKPLLFSLTTVSLVSITKLLYANHFHIPFPPPSLSIAGVTIISAIILYLFSKNHSSHLPPGPLSIPVFGNWLQVGNDLTHRLLASMTKTYGPVFLLKLGFRNLVVVSDPQLASEVLHSKGVEFGSRPRNVVFDIFTGKGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVQNYSSMWEQEMDLVVRDLNADQTVRSEGIVIRRRLQLTLYNIMYKMMFDTKFESLEDPLFIQATKFNAERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCKDLQAWRLEFFNKNYVEDRRKIMAANGDKHKISCAMDHIIEAEMKGEISEENVIYIVENINVAAIETTLWSMEWVIAEVVNHPIVQSKIREEISSVLKEEPVTESNLHKLPYLQATVKEALRLHTPIPLLVPHMNLEEAKLGGYTIPKESKVVVNAWWLANNPAWWKNPEEFRPERFFEEENGTDAVAGGNKVDFRYVPFGVGRRSCPGIILALPILGLVTAKLVSSFEMNAPNGTKVDMTEKGGQFSLHLANHSTVLFHPIK* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0354 535 Pfam Cytochrome P450 64 522 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0354 535 PANTHER OS02G0467000 PROTEIN 13 535 - -
Lja5g0354 535 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0354 535 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0354 535 PRINTS E-class P450 group I signature 427 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0354 535 PRINTS E-class P450 group I signature 92 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0354 535 PRINTS E-class P450 group I signature 116 137 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0354 535 PRINTS E-class P450 group I signature 469 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0354 535 PRINTS E-class P450 group I signature 344 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0354 535 PRINTS E-class P450 group I signature 479 502 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0354 535 PRINTS E-class P450 group I signature 324 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0354 535 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0354 535 PRINTS P450 superfamily signature 470 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0354 535 PRINTS P450 superfamily signature 335 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0354 535 Gene3D Cytochrome P450 55 528 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0354 535 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 472 481 IPR017972 GO:0005506|GO:0016705
Lja5g0354 535 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 13 535 - -
Lja5g0354 535 SUPERFAMILY Cytochrome P450 64 523 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0354 Lja-Chr5 3174526 3176236 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0354 73 533 Monolignol Biosynthesis Gene Families AT2G30490 64.655 0.0 623
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0354 K00487 - gmx:100812188 864.374