Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0317 ATGGCAGCCGCAGCACCACCATCCCCAACAACTCCGGCAGCCACAACACTGCCAGAAACTGCCACACCCTGTCACCCTATGTTCACCCGCATCCGCCTTGCCACTCCTTCCGATGTACCCCACATCCTCAAAATGACATACCAGTTGGCAGTCTTCGAACACTTCACCCACCTCTTCGTCGGCACCGAGTCCTCACTCTCCTCCGCACTCTTCTCTCCCAACGTCCAACCCTTCCACTCATCCACCGTCTTCATCCTCGAAGCATCTCAAAATCCCTTCACTGATGACACCCACTTTGACAATGACCCTTTCTACAAGCCAACAATGAAGGTTGTGAACTTGGACCTCATAATCGATGACCCAGAAAAGGAAACGTTCAGAAATCAGCATGGGAATGACATTTTCATTGTTGGGTTTGTGTTGTTTTTCCCAAACTATTCCACTTTTATGGCGAAGGCTGGGTTCTATGTTGAGGATTTGTTTGTGAGGGAATGTTATAGGAGGAAGGGGTTTGGGAAGATGCTGCTATCTGCGGTGGCTAAACAGGCTGTGAAAATGGGGTATGGGAGGGTGGAGTGGATTGTGCTTGATTGGAATGTTAATGCCATCAAGTTTTATGAGGGTATGGGTGCTAAAATCTTGCAGGAATGGAGGCTTTGCAGGCTTATTGGAGATGATTTGCAGGCTCATGGAGGTTCTGATTAA 705 0.4865 MAAAAPPSPTTPAATTLPETATPCHPMFTRIRLATPSDVPHILKMTYQLAVFEHFTHLFVGTESSLSSALFSPNVQPFHSSTVFILEASQNPFTDDTHFDNDPFYKPTMKVVNLDLIIDDPEKETFRNQHGNDIFIVGFVLFFPNYSTFMAKAGFYVEDLFVRECYRRKGFGKMLLSAVAKQAVKMGYGRVEWIVLDWNVNAIKFYEGMGAKILQEWRLCRLIGDDLQAHGGSD* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0317 234 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 30 225 IPR016181 -
Lja5g0317 234 PANTHER ACETYLTRANSFERASE NATA1-LIKE-RELATED 27 233 IPR039534 GO:0016747
Lja5g0317 234 MobiDBLite consensus disorder prediction 1 21 - -
Lja5g0317 234 Pfam Acetyltransferase (GNAT) family 120 210 IPR000182 GO:0016407
Lja5g0317 234 Gene3D - 29 232 - -
Lja5g0317 234 PANTHER DIAMINE N-ACETYLTRANSFERASE 27 233 - -
Lja5g0317 234 CDD NAT_SF 136 192 - -
Lja5g0317 234 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 136 228 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0317 Lja-Chr5 2813292 2813996 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lja5g0317 Acetyltransf_1 5.9e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0317 K22883 - jre:108997151 294.278