Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0266 ATGACTCCAATTGAAGTATTAATAGCCAGCTTTCCCATTGAAATAAGAGTTGTCTCCACTTCCATGTCCACTGTCACTTGTCTTCAACCCACATCCTGGGGACCAGAAGGAAACTCATTAGATCTTAATAATTTGCCTGATGACTACTCTAGAGATGGTCAACAACTCAAGAATAGGACCTCAGCTGGTAGCAACAAAAAGGAAAGCGGCGAGGATGATGGAAAAGACGAGTGTGGGAAGGTCTACGAGTGTAGATTTTGTTCCCTTAAGTTCTGCAAGTCTCAGGCTCTTGGGGGACACATGAACCGACACCGTCAAGGCATGCTAGCTAAGAAGGAAACAGAGAAGCTGAACCAAGCACGTGAGCTGCTCTTCAATAATGATCCTAACCTTGCTGCTGCGCAAGGAGCTCCTCACCTAGGGTACTGCCAACCAATAGCACCAGGGGGATATCATCCACCTGGCAACATGGCAGACCCAACACTGCCTCTGAGATTCCCAGGATACATGTCTGGTTCATCTTCAACTCACATACAACCACCCCCACCACCGCCACAGCCATATCAACAACCATATCTATATGCTTCACCCGCACTTCCCATGTCTTTTCCTTCTCATTTCCCTCAGCACCCGATCAAAGATTACCATGTGACGGGTCATGTCATGAGTAGCAACCACCAGCATTATGGTCACCACCACAACATGAACTATGCAGGAGGTGAGTCTAGTTACACTTGCATAGGAGCACCGGTGGGACAAGGGTTCCCGGGAAGTGGTGTTAAGGACATGTCACTGCAGCATCATTTGGATCCTTCTTCAGCAAGGATCAATCGGTTTCAAGATGGTTTCTAA 852 0.4765 MTPIEVLIASFPIEIRVVSTSMSTVTCLQPTSWGPEGNSLDLNNLPDDYSRDGQQLKNRTSAGSNKKESGEDDGKDECGKVYECRFCSLKFCKSQALGGHMNRHRQGMLAKKETEKLNQARELLFNNDPNLAAAQGAPHLGYCQPIAPGGYHPPGNMADPTLPLRFPGYMSGSSSTHIQPPPPPPQPYQQPYLYASPALPMSFPSHFPQHPIKDYHVTGHVMSSNHQHYGHHHNMNYAGGESSYTCIGAPVGQGFPGSGVKDMSLQHHLDPSSARINRFQDGF* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0266 283 ProSitePatterns Zinc finger C2H2 type domain signature. 84 104 IPR013087 -
Lja5g0266 283 MobiDBLite consensus disorder prediction 36 76 - -
Lja5g0266 283 Gene3D Classic Zinc Finger 52 133 - -
Lja5g0266 283 MobiDBLite consensus disorder prediction 36 63 - -
Lja5g0266 283 PANTHER ZINC FINGER PROTEIN JAGGED 35 261 IPR031113 GO:0007275
Lja5g0266 283 PANTHER ZINC FINGER PROTEIN JAGGED 35 261 IPR045320 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0266 Lja-Chr5 2350496 2356752 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0266 36 254 C2H2 Transcription Factor Family AT1G13400 39.827 2.57e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0266 - - aprc:113871902 305.449