Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0249 ATGGCTCTCCAAATCATGAAACCACTTCTTTTCACTCTCACAACATTATCACTTATTGCAATCACAAAACACTTCTCTTCTAACTATCTCTCCATTGCTAGTGCCACCATCATCTCTTCTCTCATCATGTACTTGTTCTTTTCCAATTCTAAAAACAACTCTGCACCTCTCCCTCCAGGGCCTCACTCCTTCCCTATATTTGGCAACTGGCTCCAAGTTGGCAACGACCTCACCCACCGTCTCTTAGCATCCATGTCAAAAACCTTTGGCTCCGTGTTCCTCCTCAAACTCGGTTCCAAAAACTTGGTCGTGGTCTCTGATCCTCAACTAGCCTCCGAAGTCCTCCACTCAAAAGGCGTGGAATTCGGTTCTCGACCGCGAAATGTAGTGTTCGACCTCTTCACTGGAAACGGCCAAGACATGGTTTTCACAGTGTATGGTGAACACTGGCGAAAAATGCGCAGGATCATGACACTGCCCTTCTTCACCAACAAGGTTGTCCAGAATTACAGCAGCATGTGGGAGCAAGAGATGGACCTTGTCGTCCGTGACCTCAATGCCAATGAGACAGTGAGAAGCGAAGGGATTGTTATCAGAAGGCGTCTCCAGCTGATGCTCTACAACATCATGTACAGGATGATGTTTGATGCCAAGTTTGAGTCCTTAGAAGACCCTTTGTTCATTCAGGCCACAAGGTTCAACTCTGAGAGAAGCCGTTTAGCACAGAGTTTCGAGTACAATTATGGAGATTTCATCCCATTGCTAAGACCTTTTTTGAGAGGATACCTGAACAAGTGCAGGGACTTGCAAACTAGGAGGCTGGAAAAAATCATGGCTGCCAATGGGGACAAGCACAAGATAGGCTGTGCAATGGATCACATCATAGAAGCTGAGATGAAAGGAGAAATCAGTGAAGAGAATGTGATTTACATTGTAGAGAACATCAATGTTGCAGCAATAGAGACAACACTGTGGTCCATGGAGTGGGCAATTGCAGAGGTTGTTAATCATCCAATTGTTCAAAGCAAGATGCGTGAGGAGATATCAAGTGTGCTTAAAGGGGAGCCAGTGACAGAGTCCAATCTACACAGACTACCATATTTGCAAGCCACTGTGAAAGAGACATTGAGACTTCACACTCCAATTCCTCTATTGGTGCCACACATGAACCTGGAAGAGGCACAGCTAGGAGGATATAGAATTCCTAAGGAATCTAAGGTGGTGGTGAATGCTTGGTGGCTTGCTAACAACCCAGCATGGTGGAAGAATCCAGAGGAGTTCAGGCCAGAGAGGTTCTTTGAAGAGGAGCATGGAACAGAAGCTTCTGTAGGAGGGAATAAGGTTGATTTTAGATTTGTGCCATTTGGTGTTGGGAGGAGGAGTTGCCCTGGGATCATACTTGCATTGCCAATATTGGGAATTGTCCTTGCAAAGTTGGTGTCAAATTTTGAGATGAAGGCTCCAAATGGAACAAAGGTAGACATGACTGAAAAAGGAGGACAATTCAGCTTGCACCTTGCAAACCACTCCACTGTTCTGTTCCATCCAATAAAATAG 1557 0.4534 MALQIMKPLLFTLTTLSLIAITKHFSSNYLSIASATIISSLIMYLFFSNSKNNSAPLPPGPHSFPIFGNWLQVGNDLTHRLLASMSKTFGSVFLLKLGSKNLVVVSDPQLASEVLHSKGVEFGSRPRNVVFDLFTGNGQDMVFTVYGEHWRKMRRIMTLPFFTNKVVQNYSSMWEQEMDLVVRDLNANETVRSEGIVIRRRLQLMLYNIMYRMMFDAKFESLEDPLFIQATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCRDLQTRRLEKIMAANGDKHKIGCAMDHIIEAEMKGEISEENVIYIVENINVAAIETTLWSMEWAIAEVVNHPIVQSKMREEISSVLKGEPVTESNLHRLPYLQATVKETLRLHTPIPLLVPHMNLEEAQLGGYRIPKESKVVVNAWWLANNPAWWKNPEEFRPERFFEEEHGTEASVGGNKVDFRFVPFGVGRRSCPGIILALPILGIVLAKLVSNFEMKAPNGTKVDMTEKGGQFSLHLANHSTVLFHPIK* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0249 518 Gene3D Cytochrome P450 44 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0249 518 SUPERFAMILY Cytochrome P450 58 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0249 518 Pfam Cytochrome P450 58 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0249 518 PRINTS E-class P450 group I signature 205 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0249 518 PRINTS E-class P450 group I signature 86 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0249 518 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0249 518 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0249 518 PRINTS E-class P450 group I signature 110 131 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0249 518 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0249 518 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0249 518 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0249 518 PRINTS E-class P450 group I signature 410 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0249 518 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0249 518 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0249 518 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0249 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Lja5g0249 518 PANTHER OS02G0467000 PROTEIN 1 518 - -
Lja5g0249 518 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0249 Lja-Chr5 2183671 2185260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0249 16 516 Monolignol Biosynthesis Gene Families AT2G30490 61.553 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0249 K00487 - gmx:100812188 845.884