Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0239 ATGGCGGTTGCAACCGGAGTTCATGGATGGAGAGACACAAAGAGTCTGTCCGTCCAATTCATCACCGGCCGGTGGTTCTTGGTGTTCGGCTCCTTCCTTATCATGGCGGCTGCCGGAGCCACCTACATGTTTGGCCTCTATTCCAGTGACATCAAAACAACACTCGGCTATGACCAATCCACTCTCAACCTCCTCAGTTTTTTCAAGGACTTAGGTAGCAACGTTGGCATCCTCTCCGGCCTAATCAACGAGCTCACGCCACCGTGGGTGGTGCTAACAATCGGTGCAGTACTCAATTTTTTAGGGTACTTCATGATTTGGCTCTCAGTCACAAAGAAAATTGCAAGACCTCAAGTATGGCAAATGTGTCTCTACATCTGCATAGGTGCAAACTCTCAATCTTTTGCCAACACTGGTGCTTTGGTCACTTGTGTCAAGAACTTTCCACAAACTCGTGGGGTGGTGTTGGGAATTCTCAAAGGCTACGTGGGACTCAGTGGAGCAATCATCACACAACTCTACTTTGCCTTCTATTACAATGATTCCAAGGGTTTGATTCTCTTCATAGGTTGGCTTCCTGCAGCAACTTCCCTCGTTTTCCTTCGAACCATTCGATACATGAAGCCGGTGAAGCAGAGTAATGAGCTCAAGGTTTTCTTCAATTTCTTGTATATTTCCCTTGGCCTTGCTGGGTTTCTACTTGTCATGATTGTAATTCAGAAAAGGATGGATTTCACGAGGAGTGAATATGGTGTGAGTGCTGGTATGGTTATTTTCTTGATGTTTCTTCCACTTGCTGTGGTTTTCAATGAAGAATACAAAATCTGGCAGAGGAAGAAGCTTGCTTTGGAGGATTCCACACCGGTGAAAATAGTAACCGAGGGTGAAAAATTCAGCCAGAGTGAAGCTAACACTACCAACTCTGTTTCAAACAAAACAGAGGACTCTGTTTCCAATAAAACAGGGGACTCTGTTTTCAGAACAGAGGACAGTGCTAAATGGTGGCAAAATGTGTTTACTCCACCAAAAAGAGGTGAGGACTATACAATTCTTCAAGCTCTCTTCAGCATTGACATGTTAATTCTATTTATAGCTTGCATTTGTGGTGTTGGTGGGACTTTGACTGCAATTGACAATCTGGGTCAAATTGGAACTGCTCTGAGGTACCCCAAGAAAAGCATAAGCACTTTTGTGTCACTAGTGAGCATTTGGAATTATGCAGGGCGGGTTTTCTCTGGATTTGTTTCTGAACATGTTCTAACAAAGTACAAATTCCCCCGTCCTCTTATGCTTACTTTAATCCTGTTTTTATCATGTGTGGGTCACATTCTGATAGCTTTTGATGTGCCAAATGGACTCTATGTGGCTTCAGTGATCATTGGGTTCTGTTTTGGGGCACAGTGGCCTTTACTTTTTGCCATCATATCTGAACTTTTTGGACTCAAATACTATGCAACTTTGTACAATTTTGGAAGTGCAGCAAGTCCACTCGGGTTGTATGTGCTTAATGTGAAGATCACAGGTCATTTATATGACAAAGAAGCTAAGAAGCAATTAGCAGCATTGGGGCTACAGAGAAAAGAAGGGCATGAATTGAATTGTGTTGGTGTTGATTGCTTTAAATTGTCCTTCATAATTATCACTGCTGCAACTTTCTTTGGTGCACTTGTTTCACTGATTTTGGTGGCTAGGACTAGAAAGTTTTACAAAGGTGACATATACAAGAGGTACAGTGAGGAGGCCACGGTGGTGGAAGCTGAAATGGTGACAGGGAAAGAAGCCAAAGAGGTGACAACTTAG 1800 0.4322 MAVATGVHGWRDTKSLSVQFITGRWFLVFGSFLIMAAAGATYMFGLYSSDIKTTLGYDQSTLNLLSFFKDLGSNVGILSGLINELTPPWVVLTIGAVLNFLGYFMIWLSVTKKIARPQVWQMCLYICIGANSQSFANTGALVTCVKNFPQTRGVVLGILKGYVGLSGAIITQLYFAFYYNDSKGLILFIGWLPAATSLVFLRTIRYMKPVKQSNELKVFFNFLYISLGLAGFLLVMIVIQKRMDFTRSEYGVSAGMVIFLMFLPLAVVFNEEYKIWQRKKLALEDSTPVKIVTEGEKFSQSEANTTNSVSNKTEDSVSNKTGDSVFRTEDSAKWWQNVFTPPKRGEDYTILQALFSIDMLILFIACICGVGGTLTAIDNLGQIGTALRYPKKSISTFVSLVSIWNYAGRVFSGFVSEHVLTKYKFPRPLMLTLILFLSCVGHILIAFDVPNGLYVASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSAASPLGLYVLNVKITGHLYDKEAKKQLAALGLQRKEGHELNCVGVDCFKLSFIIITAATFFGALVSLILVARTRKFYKGDIYKRYSEEATVVEAEMVTGKEAKEVTT* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0239 599 PANTHER MFS TRANSPORTER 7 595 - -
Lja5g0239 599 CDD MFS_Mch1p_like 23 555 - -
Lja5g0239 599 Pfam Nodulin-like 24 269 IPR010658 -
Lja5g0239 599 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 7 595 - -
Lja5g0239 599 Gene3D MFS general substrate transporter like domains 335 570 IPR036259 -
Lja5g0239 599 SUPERFAMILY MFS general substrate transporter 24 571 IPR036259 -
Lja5g0239 599 MobiDBLite consensus disorder prediction 302 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0239 Lja-Chr5 2119430 2121468 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0239 14 580 Nodulin-like Gene Family AT2G39210 69.136 0.0 814
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0239 - - pvu:PHAVU_007G024800g 948.347