Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0229 ATGGATGCTTCGGAAATCACAAGTTCCCTTAGGAAAACCCAAGTTGAGAGTAAGGGGCATTTTCCGGCCAAATCCGGCCACCAATGGGAAAACGAGTTGGGCCACGATGATCCTTGCCACAAGGAGAACAAAATCCCTCAATCAATTTCTCATACAATGAAACAAAGCACGCGTAACTGGCAATCAATGTATTCACGCCACATCATCATTAACTTCCATAACGAATTTACAGACTCAACAAACTTTGGTTTCTTCTTCTCAATTCTCATTCATTCTTTTCCCTTCAATTCACTTTGTTCTTATCTGAATCACTCCGAAACCTGCGAATTCGATCCAAGGAACCGCTTGAGAGATGTCGACTCTGGAGGAGGAGGAGAATTCAACGCCAAAGATACATGTACAGACTCCGCCAATGGCCCCCGCCGGCGACTGCCACCGGCGGAGTGGGTGGAGGAGGGAGGACTTGGTGAAGAGAGGGTCATTGGGGTTGCGAGGGATCGCCCTGCTTTTCTCTCTGATCTCTCTGTTAGAGAACAAAGGAGATCAGAAGACGGGTTCAACTGGAGAAAATATGGACAAAAACAAGTAAAAGGAAGTGAAAATCCGCGCAGTTACTACAAATGCACGCATCCAAGTTGCTCGATGAGGAAGAAAGTTGAGAGGTCGTTGGATGGAGAAATTACTGAAATAGTATATAAGGGAAGTCATAACCACCCCAAGCCCCAGTCTACGAGAAGAACAAGCTCTCAACAATTTCATCAACCCTCTTCATCATGCACCAACTCAGTGATTTCTGATATTCAAGAAGATTCTTCAGCATCTGTGGGAGAGGAAGACTTTGCGGCGCAAACATCACAAACCAGTTATTCTGGAGGAAATGATGATGACCTTGGACCAGAGGCCAAAAGATGGAAGGGAGAAAATGAAAATGATTGCTATTCTGCCTCAGAGAGCAGAACTGTCAAGGAACCTAGAGTTGTAGTTCAAACTAGAAGTGAAATTATATACTTGATGATGGCTATAGGTGGAGGAAATATGGACAGAAAGAGCTATTACAAATGTACAGCCCCAGGTTGTTCAGTGAGAAAACACGTTGAGAGAGCCGCACATGATATCAAATCTGTTATCACAACTTATGAAGGGAAGCACAACCATGATGTACCTGCTGCACGCGGTAGTGCAGGTTATAACATGAACAGAAATTCTATGAACAGCACTGTATCAGCACCTATAAAGCCCTCAGTGGTGAACCGTTATAATAGTGCATCAAGTGTCACAAATTCAGTTCATAATAAGACTAGGCTTCCAGAAAATGGAAATCAAGAATCATAG 1332 0.4384 MDASEITSSLRKTQVESKGHFPAKSGHQWENELGHDDPCHKENKIPQSISHTMKQSTRNWQSMYSRHIIINFHNEFTDSTNFGFFFSILIHSFPFNSLCSYLNHSETCEFDPRNRLRDVDSGGGGEFNAKDTCTDSANGPRRRLPPAEWVEEGGLGEERVIGVARDRPAFLSDLSVREQRRSEDGFNWRKYGQKQVKGSENPRSYYKCTHPSCSMRKKVERSLDGEITEIVYKGSHNHPKPQSTRRTSSQQFHQPSSSCTNSVISDIQEDSSASVGEEDFAAQTSQTSYSGGNDDDLGPEAKRWKGENENDCYSASESRTVKEPRVVVQTRSEIIYLMMAIGGGNMDRKSYYKCTAPGCSVRKHVERAAHDIKSVITTYEGKHNHDVPAARGSAGYNMNRNSMNSTVSAPIKPSVVNRYNSASSVTNSVHNKTRLPENGNQES* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0229 443 ProSiteProfiles WRKY domain profile. 344 388 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja5g0229 443 MobiDBLite consensus disorder prediction 232 319 - -
Lja5g0229 443 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 173 442 IPR044810 GO:0003700
Lja5g0229 443 MobiDBLite consensus disorder prediction 1 15 - -
Lja5g0229 443 SUPERFAMILY WRKY DNA-binding domain 178 241 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lja5g0229 443 MobiDBLite consensus disorder prediction 296 318 - -
Lja5g0229 443 MobiDBLite consensus disorder prediction 23 39 - -
Lja5g0229 443 Pfam WRKY DNA -binding domain 183 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja5g0229 443 Pfam WRKY DNA -binding domain 344 385 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja5g0229 443 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 173 442 - -
Lja5g0229 443 MobiDBLite consensus disorder prediction 121 144 - -
Lja5g0229 443 SMART WRKY_cls 344 387 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja5g0229 443 SMART WRKY_cls 182 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja5g0229 443 MobiDBLite consensus disorder prediction 237 293 - -
Lja5g0229 443 ProSiteProfiles WRKY domain profile. 177 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lja5g0229 443 SUPERFAMILY WRKY DNA-binding domain 344 388 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lja5g0229 443 MobiDBLite consensus disorder prediction 1 39 - -
Lja5g0229 443 MobiDBLite consensus disorder prediction 421 443 - -
Lja5g0229 443 Gene3D WRKY domain 339 389 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lja5g0229 443 Gene3D WRKY domain 173 242 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0229 Lja-Chr5 1995145 2000101 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0229 177 416 WRKY Transcription Factor Family AT2G38470 54.182 8.79e-81 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lja5g0229 WRKY 1.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0229 K13424 - gmx:100776837 412.92