Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0216 ATGGAGCTTAACCACCCTTTCTCTATTTCCTCCATTTCCTTCAGTCTCTTTCTCATCATCTTATTCAAGTTACTTAAAAGATCAACTTCTAGCAACTCCAACACCAATTTACCACCAGGACCATGGACACTGCCTCTCATAGGAAACTTACACCAGATTGGAGGCTCGATGCTGCATCACAGCTTCAGAAATTTGGCAAACAAGTATGGACCCTTAATGCACCTGAAACTAGGAGAGGTATCCCACATCATAGTCACTTCACCAGAAATTGCAGAACAGGTTATGAAAACACATGACCTTAACTTTTGTGACAGGCCAAACTTTCTATTATCCACAATAAGTTCTTACAATGCCACAAACATAGCTTTCGCTCCATATGGACAATACTGGAGGCAGCTACGAAAGATATGCACGATAGAGCTAGAAGAAGAAGTGTCAGAACTTGTTAAAGCAATATCTGCTAGTGATGAAGGATCGGTTGTTAATCTCAGTGAGAAAATCTTCTCATTGACATATGGGATAACAACGCGCGCAGCTTTTGGGAAGATAAACAAACACCAACATGTGTTCAAATCAGCTAGTGAGGAAAAATTGAATCTGTCAGGAGGGTTTTGTGTTGCTGATCTCTATCCTTCTTTAGGAGTGCTTCAAAGGATGAGTAAGGACAAGGCCAAAATGGAAAAACTGCACAGAGAGGTTGATAGGATATTGCAAGACATCATCGATGATCACAGAAATGAAATGAGTAGCAGCAGGCACAGGGAAGCTGCAGGGTGTGAAGATCTAGTTGATGTTCTTCTTAAGCTTCAAAAGGAGCAGCAGGAACAGGATCAGTATGCTTTGACTGATGACAATATTAAAGCAGTCATTCAGGATATGTTCTCCGCCGGTGGAGAAACAACTTCAGGGATTGTGTTGTGGGGGATGTCAGAAATGGTAAGGAACCCAAAGGTGATGGAAGAAGCACAAGCTGAAGTAAGACAGGTGTTTGATAGCAAGGGGAATGTGGATGAAATAGAGATGCATCAATTGATATACTTGAAGTGTGTCATCAAAGAAACCCTGAGGCTCCACCCAACAGTACCATTTTTAGTTCCAAGAGAATGTAGAGAGAGGTGTGAAATAAATGGGTATGAGGTACCAGCTAAGAGCAGGGTCAATGTCAATGTTTGGGCAATTGGAAGAGATCCTAAGTATTGGGATGAAGCTGAGACTTTTAAACCTGAGAGATTTCTCAATAGCCAAATTGATTTCAGAGGCACAAACTTTGAATATCTCCCATTTGGTGCTGGAAGGAGGATGTGTCCAGGCATTGCATTTGCCTTACCCAACATAGAGCTGCCACTCGCCAAATTACTTTACCACTTTGATTGGAAGCTTCCCAATGGAATGAAGAATGAAGAAATCGACATGACTGAGTCATTTGGGTTAACTCTAAGTAAAGTAAATGACCTCTGCTTGATTCCCATCACTCGTAGACAACATCTCTAG 1491 0.4165 MELNHPFSISSISFSLFLIILFKLLKRSTSSNSNTNLPPGPWTLPLIGNLHQIGGSMLHHSFRNLANKYGPLMHLKLGEVSHIIVTSPEIAEQVMKTHDLNFCDRPNFLLSTISSYNATNIAFAPYGQYWRQLRKICTIELEEEVSELVKAISASDEGSVVNLSEKIFSLTYGITTRAAFGKINKHQHVFKSASEEKLNLSGGFCVADLYPSLGVLQRMSKDKAKMEKLHREVDRILQDIIDDHRNEMSSSRHREAAGCEDLVDVLLKLQKEQQEQDQYALTDDNIKAVIQDMFSAGGETTSGIVLWGMSEMVRNPKVMEEAQAEVRQVFDSKGNVDEIEMHQLIYLKCVIKETLRLHPTVPFLVPRECRERCEINGYEVPAKSRVNVNVWAIGRDPKYWDEAETFKPERFLNSQIDFRGTNFEYLPFGAGRRMCPGIAFALPNIELPLAKLLYHFDWKLPNGMKNEEIDMTESFGLTLSKVNDLCLIPITRRQHL* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0216 496 Pfam Cytochrome P450 38 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0216 496 SUPERFAMILY Cytochrome P450 38 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0216 496 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0216 496 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0216 496 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0216 496 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0216 496 PANTHER CYTOCHROME P450 71D10 11 493 - -
Lja5g0216 496 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0216 496 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0216 496 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0216 496 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0216 496 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0216 496 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0216 496 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0216 496 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0216 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Lja5g0216 496 Coils Coil 219 239 - -
Lja5g0216 496 Gene3D Cytochrome P450 23 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0216 496 PANTHER CYTOCHROME P450 71B11-RELATED 11 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0216 Lja-Chr5 1905200 1907093 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0216 16 489 Cytochrome P450 AT3G26300 40.486 4.94e-131 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0216 - - lja:Lj5g3v2240830.1 696.812