Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0201 ATGGAGCTTTCTGCAATCCCCACCTTCAACGCTGCTACTTCTCATGCTTCGTTATTTCCATTTCCATCGACTCAACTTCGGTGCTCTCTTCTTCCCCGCTATCATGCTACCTTTCGCAATTCCAAACCCTTCCTTCAGATCAGGTTTTGCGCGGCGGCGTCATCGAACGGTTACGGCGGCAGCGGAGTCGAGAGCGGTGAATCGGACCCTGATTTCGTCGAAGTTATTGTCATTGGTGGTCGGAAGGACGCCGTGCTTGATTTCTGCTTGAACTCGCCGTTTCAGTTGTCGTCGCTTCGGTTTTGGAATATTCTGATGAAAGAATCGGAAGAGGTGCAGTTACAACGATGGTCGATTCAAGAAGAACCTCGCCCAGAAATTGTGAAAGCTCCAGCATTTATGAAGTCATGTTCAAAGACTATTGTCCTTGTAGCTAGTGCAGGATATGGATTGGACCATACTGTTGCAGTTGATATTTTTGAAACTGTAAGGTCGAAAAATGGATTAACAGTTGCTATAGTGCTGAAGCCTTTTAGCTTTGAAGGGTTAAGACGACAAGATGAGGTGAAAGCTTTGATGGGGAAACTTAAGGACAACACTAATTTACTTATTGAAATTGATATTGATGCACTGCTTAAAAAAGACTTATTGACTCTAGATGAGGCTATGAAGACTGCGAATGATGCAGTTTTGCTAGCTATTAAGGCTATATCTGTTCTAAGATCTGGGATGCACAGAAAATTCATAGATAAAATGCATGATGATATGAAAGAGACCAGCACTTCAGAAATCAATAAAATACTGGAATGCTATAAAGAGGCAAGAATTGGATTTGGAGCTGCATATAACATCAGAACTTCAATTTTTCAGTCTATATTTGATTGTCCTTTCCTCGGTGTTTCTTTGAAGGATCCAAATAGCATAGTGATATGCATTCTCACACGTTCTGTACCCATCAATGATAGTGATATAGCAGTGTTTTTGCATACTTTCCGTCAAACTACACAATACATGGGAGATATTATAATATCAACAGTATTTGAGCCTGATGTCGAGCCCAACCTTCTGATAACAACTGTCCTTGTGCTTGGCAGTTTAAATGTTCAGCAGCCTTCCCAGAGTGGGGGTCTACTGTCCAGACTTGCCCTGCATTTTCCTCATGTTTTTAGCTTTTGGGGAAAACATAATCAGCAACAAATGGTCACTGGGAAAGAGAATGCAGTATGTGAAGAAATGATGGGTTCTTATGACATTGATGAGGGGGCAAATAAGATTGCTCCCAGTGTCATGGATGACAGGTTTGACAAGTACTATGAAGAGTTGGAGCCAGCAGTGAGCAACATCAGCTCAAAGTTGTCTGCTTCAAGGGATGTTGAAAAAGATGAGGAACATTTATTTGACGACACTGCAAATTATCCTGCCCTTTATGACTCCAGTACTGAAGAAGAATCAAATCAAGTTGCATTAGGAGACTCTGCTTTTCCAAGAGAGCAGCTTGAAAACTGGAGTCTTGGTCCTGGATTTGAAGTGGCAAGGGAATGGGCCCAAGAACGGGCAGCAGATGCACCCATGGTTGATAACATAAGCATATTCCATCTTCCTGTTGGTGTGAGGCATTCAGAAGAGTTGAAAGACTGTTTAGAAATCTCAGTTATGACAAAAAAACTTGAGTCTGAAACTGATAATGATATGAAAGTACCAACGTTAAATGGAGGTACGTCTAGTTGGAGTAGTGTGACTGATGCAGGTGTAGGAGCAGTAAGGGAATTTGCTTCTTCACTTTTGAAGGGAAAGTATGCTAACAAATCAAAGAAGGATGGAGTTCTTTCTGTTCGTGCTGCATCTATGCTGGAGTCAGAACGCGATTTGTCAAAAAAATGGAGTCCTGTTGTAGAAATGCAATACAGGGGAGGAAGATACAAGGGGCGATGCCAGGGAGGTCTGCCAGAAGGGAAGGGGCGTCTTATCCTTGTAGACGGAAGTATATATGATGGTCTTTGGCGCTATGGTAAGAGATCAGGCCTCGGTACTTTCTATTTCAAAAACGGAGATATGTTTCAAGGATCATGGAGGGATGATGTCATGCACGGCAAGGGTTGGTTTTATTTTCACACCAGTGATCGGTGGTTTGCGAACTTTTGGAAAGGAAAGGCTAATGGTGAAGGGCGGTTCTACACAAAGTCTGGTGATGCCTACTTTGGGAATTTCAAAGATGGATGGCGGCATGGCCAGTTTCTTTGTATTAATGCTGATGGGACAAGGTACACTGAAATTTGGGAACATGGTGTTCTTTTAGACAGCAAGCAGTTTGAGGGATGA 2319 0.4256 MELSAIPTFNAATSHASLFPFPSTQLRCSLLPRYHATFRNSKPFLQIRFCAAASSNGYGGSGVESGESDPDFVEVIVIGGRKDAVLDFCLNSPFQLSSLRFWNILMKESEEVQLQRWSIQEEPRPEIVKAPAFMKSCSKTIVLVASAGYGLDHTVAVDIFETVRSKNGLTVAIVLKPFSFEGLRRQDEVKALMGKLKDNTNLLIEIDIDALLKKDLLTLDEAMKTANDAVLLAIKAISVLRSGMHRKFIDKMHDDMKETSTSEINKILECYKEARIGFGAAYNIRTSIFQSIFDCPFLGVSLKDPNSIVICILTRSVPINDSDIAVFLHTFRQTTQYMGDIIISTVFEPDVEPNLLITTVLVLGSLNVQQPSQSGGLLSRLALHFPHVFSFWGKHNQQQMVTGKENAVCEEMMGSYDIDEGANKIAPSVMDDRFDKYYEELEPAVSNISSKLSASRDVEKDEEHLFDDTANYPALYDSSTEEESNQVALGDSAFPREQLENWSLGPGFEVAREWAQERAADAPMVDNISIFHLPVGVRHSEELKDCLEISVMTKKLESETDNDMKVPTLNGGTSSWSSVTDAGVGAVREFASSLLKGKYANKSKKDGVLSVRAASMLESERDLSKKWSPVVEMQYRGGRYKGRCQGGLPEGKGRLILVDGSIYDGLWRYGKRSGLGTFYFKNGDMFQGSWRDDVMHGKGWFYFHTSDRWFANFWKGKANGEGRFYTKSGDAYFGNFKDGWRHGQFLCINADGTRYTEIWEHGVLLDSKQFEG* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0201 772 Gene3D Tubulin/FtsZ, GTPase domain 114 363 IPR036525 -
Lja5g0201 772 Pfam MORN repeat 732 744 IPR003409 -
Lja5g0201 772 Pfam MORN repeat 663 685 IPR003409 -
Lja5g0201 772 Pfam MORN repeat 645 661 IPR003409 -
Lja5g0201 772 Pfam MORN repeat 686 707 IPR003409 -
Lja5g0201 772 PRINTS Cell division protein FtsZ signature 262 283 IPR003008 GO:0005525
Lja5g0201 772 PRINTS Cell division protein FtsZ signature 168 189 IPR003008 GO:0005525
Lja5g0201 772 Gene3D - 713 771 - -
Lja5g0201 772 PANTHER PROTEIN ACCUMULATION AND REPLICATION OFS PROTEIN 138 771 - -
Lja5g0201 772 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 637 763 - -
Lja5g0201 772 SUPERFAMILY Tubulin nucleotide-binding domain-like 75 239 IPR036525 -
Lja5g0201 772 SMART morn 730 751 IPR003409 -
Lja5g0201 772 SMART morn 684 705 IPR003409 -
Lja5g0201 772 SMART morn 661 682 IPR003409 -
Lja5g0201 772 SMART morn 638 659 IPR003409 -
Lja5g0201 772 Gene3D - 639 712 - -
Lja5g0201 772 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 138 771 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0201 3 772 PP2C-type Phosphatase Gene Family AT1G75010 44.275 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0201 - - gsj:114371951 1119.38