Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0199 ATGAAGCTTGGGTTTGTTGTAATGCTCTTTGCAATGGTCACTTCACTACCTTATGCTGTAGGTAATCCTCAGGAGGCAGAAGCTCTCTTGAAGTGGAAAGCCAGCCTTGACAACCAAACCCAGACTTTGGTGCTCTCTTCATGGACAAGTAACAGTACTACTCCATGCAATTGGCTGGGAATTCAATGTGAGTCCAAATCCATCTCTATCCTGAATCTTACAAATGTTGGACTCAAAGGTACACTTCAAAGTCTCAACTTGTCATCACTTCCAAAACTCCGCACCATAGATTTAAGTAGCAATTCCTTGTATGGAGTTATACCTCACCACTTTGGGTTGATGTACAACTTGGAATCTCTGGATTTGTCTAGTAACAACCTCTTTGGTATCATTCCTTCCATAATCGGAAACTTGACAAAGGTCAAGGTGTTATATGTATACTCAAACCAACTCACTGGTCCAATTCCATCTTCCATAGGTAACTTGATCAATTTGGATTTATTTGACCTTAGTGAAAATAAACTTTCTGGCCCAATTCCTTCCACAATTGGAAACTTGAACAAGATCAGAGTATTATCTTTAGGCTTAATCCAGTTTTTGGTCCCCAACTTTTGTCATAAATATGGCTTTACCTTATCTTTATGGTCAAATCAGCTCACTGGTCCCATTCCAGCTTCCATAGGTAACTTGGTCAATGTGGAAAACGTTTTTTTTTATAAAAATAAACTTTCGGGTCCAATTCCTTCAACCATTGGAAACTTGACAAAGACCAAAGTATTATCTCTATGGTCAAATCAGCTCATTGGTCCAATTCCAGCTTCTATAGGTAACTTGGTCAATGTGGAAAATGTTACCCTTCAAGAAAATAATCTTTATGGGACAATTCCTTCCACCATTGGAAATTGGACAAAGGCCAAGGTGTTATATTTATACTCAAATCAACTCACTGGTCCAATTCCACCTTCCATAGGTAACTTGATCAATTTGGATTTATTTGACCTTAGTGAAAATAAACTTTCTGGCCCAATTCCTTCCAAAATTGGAAACTTGAAAAAGATCATAGTATTATCTTTATGGTCAAATCAGCTCACTCGTCCCATTCCAGCTTCCATAGGTAACTTGGTTAATGTGGAAAATGTTGCCCTTTATGAAAATAATCTCTTTGGGCCAATTCCATCCACCGTCGGGAACTTGACAAAGGCCAAGGTGTTATATTTATACTCAAACGAACTCACTGGTCCAATTCCACCTTCAATAGGCAACTTAATTAATTTGGATTTAATTGACCTTAGTGAAAATAAACTTTCTGGCCCAATTCCTTCAACCATTGGAAACTTGACAAAGGCGAGAGTAATAACTTTATGGTCAAATCAGCTTACTGGCTCAATTCCGACTTCCATAGGTAACATGGTCAATGTGGAAAATGTTACCTTTCAAGAAAATAATCTCTATGGGCCAATTCCTTCCTCCATTGGAAATTGGACAAAGGCCAAGGTGTTATATTTATACTCAAACCAACTCACTGGTCTAATTCCACCTTCCATAGGTAACTTGATCAATTTGGATTTATTTGACCTTAGAGAAAATAAACTTTCTGGCCCAATTCCTTCCACAATTGGAAACTTGAAAAAGATCAGAGTATTATCTTTATGGTCAAATCAGCTCACTGGTCCCATTCCAGCTTCCATAGGTATCTTGGTCAATGTGGAAAACGTTTTTCTTTATAAAAATAAACTTTCGGGTCCAATTCCTTCAACCATTGGAAACTTGACAAAGGCCAAAGTATTATCTCTATGGTCAAATCAGCTCATTGGTCCAATTCCAGCTTCTATAGGTAACCTGGTCAATGTGGAAAATGTTACCCTTCAAGAAAATAATCTTTATGGGACAATTCCTTCCACCATTGGAAATTGGACAAAGGCCAAGGTGTTATATTTATACTCAAACCAACTCACCGGTCCAATTCCACCTTCCATAGGCAACTTAATCAATTTGGATTTAATTGACCTTAGTAACTTGGTTAATGTGGAAAATGTTACCCTTTATGAAAATAATCTCTTTGGGCCAATTCCATCCACGATCGGGAACTTGACAAAGGTCCGAAGATTATCTTTAACTTTCAATGCACTTAGTGGCAACCTTCCGGTAGAGATGAACAAGCTTACTGGTTTGGAAAACTTGCAGTTAAGTTACAATAAATTCACAGGCTATTTACCTGACGATATTTGTGTGGGTGGAAAGTTGAAAAATTTCACTACTACCAATAACCAGTTCACAGGTCCAGTTCCAAGGAGTCTGAAGAATTGCTCCAGCCTCATAAGAGTCAGGCTTGACCAGAACCAACTGTCTGGAAATATAACAGATGCTTTTGGTGTATATCCAAATTTGCTCTACATTAAATTGAGTGAAAACAATTTTTATGGCCACCTTTCACCAAAATGGGGAAAGTGCAATAACCTGACAGCCCTTATAGTCTCGAACAATAATTTATCAGGTGGTATACCACTAGAGCTGGCTAAGGCAACCAATTTACATGTTCTTATCTTGTCCTCAAACCATCTGCCAGGAGAAATTCCAAAGGAGTTAGGCAACTTGAAGTCATTGATCAAACTCTCGATAAGTGGAAATCATATTTCAGGAAATATTCCAATGGAGTTGGCATCATTGCAGGAACTTGCTATCTTAGAGGTTGCAGCAAATAATTTGAGTGGGTTCATCCCACCACAACTTGGAGGTTTTCCTAAGCTATGGAATTTGAATTTGAGTCAAAATAATTTTGAGGGAAGTATTCCTGTTGAGTTTGGCCAGTTAAAAGTTCTTCAAAGTCTTGATCTTTGTGGAAATTTTTTGGGTGGAACCATACCACTAGCGCTTGCACAATTGAAATCCTTAGAAATATTGAATTTGTCACATAATAATCTTTCTGGAGTCATTCCCTCAGGTTTCGATGAGATGTTAAGCTTGACAACTGTTGATATATCATACAATCAATTAGAAGGCCTAGTTCCAAGCATTCTAGCCTTCCAAAAAGCTCCTCTAGGTGCCTTCAGAAATAACAAAGGGTTGTGTGGTAACGCATCTGGCTTGGAGTCTTGCTCAACGTTAAGCGAAAAATCTCATGATCATAAGAATAACAAAATCTTGTTGGTAGTCTTACCCCTTACCTTGGGCACTCTAATACTGGCACTTTTTGTTTGTGGAGTCAAATATCATCTCCGCCACGTTTCAAGCGCCACAATAAATGAGCATGCAGAAACACAACCACAAAATCAATTTTCAATATGGAGCTTTGATGGGAAAATGATGTATGAGAACATAATTGAAGCCACGGAAGATTTTGACAGCAAACATCTCATTGGGGCTGGAGTGCATGGATGTGTTTACAGAGCAGAATTGTCCGCTGGTCTAGTTGTGGCTGTGAAGAAACTTCATTCTTTACAAGATGGAGAAATGTCTATTCAAAAAGCTTTTGCAAGTGAGATCCAAGCTTTGACAGATATCCGACATCGTAACATTGTGAAGTTATATGGATTTTGTTCACATTCACTACACTCATTTTTAGTTTATGAGTTCTTGGAGAAGGGCAGTGTTGACAAGATTCTAAGAGATGATGAACAAGCAACTGCATTTGATTGGAATAGGAGGATGAATGTCATTAAGGATATAGCTAATGCTTTATGCTATATGCATCATGATTGCTCACCTCCAATTGTTCATCGCTACATATCCAGCAAGAATGTTCTTTGGGATTTAGATTATGTGGCTCATGTCTCAGACTTTGGAACAGCTAAGCTTCTTAATCCTAATTCAACAAACTGGACCTCATTCGCAGGCACCTTTGGATATACTGCTCCAGAACTAGCTTACACAATGAACGTGAATGAGAAATGCGATGTGTATAGTTTTGGAGTATTAGCATTGGAAATACTTTTTGGAAAGCACCCTGGGGATTTCATATCTTCACTGAGTGCTGCGAGCTCAACACTTGATGCTATGTCTTTGATAGATAAGTTGGACTTACGTCTCCCTCACCCTATAAATCCTGTTGTCAAGGAGGTGATATCAATGACAAAAATAGTTGTTGCCTGCCTAACGGAAAGCCCACGCTCTCGCCCTACCATGGACCAGGTTTAA 4134 0.3861 MKLGFVVMLFAMVTSLPYAVGNPQEAEALLKWKASLDNQTQTLVLSSWTSNSTTPCNWLGIQCESKSISILNLTNVGLKGTLQSLNLSSLPKLRTIDLSSNSLYGVIPHHFGLMYNLESLDLSSNNLFGIIPSIIGNLTKVKVLYVYSNQLTGPIPSSIGNLINLDLFDLSENKLSGPIPSTIGNLNKIRVLSLGLIQFLVPNFCHKYGFTLSLWSNQLTGPIPASIGNLVNVENVFFYKNKLSGPIPSTIGNLTKTKVLSLWSNQLIGPIPASIGNLVNVENVTLQENNLYGTIPSTIGNWTKAKVLYLYSNQLTGPIPPSIGNLINLDLFDLSENKLSGPIPSKIGNLKKIIVLSLWSNQLTRPIPASIGNLVNVENVALYENNLFGPIPSTVGNLTKAKVLYLYSNELTGPIPPSIGNLINLDLIDLSENKLSGPIPSTIGNLTKARVITLWSNQLTGSIPTSIGNMVNVENVTFQENNLYGPIPSSIGNWTKAKVLYLYSNQLTGLIPPSIGNLINLDLFDLRENKLSGPIPSTIGNLKKIRVLSLWSNQLTGPIPASIGILVNVENVFLYKNKLSGPIPSTIGNLTKAKVLSLWSNQLIGPIPASIGNLVNVENVTLQENNLYGTIPSTIGNWTKAKVLYLYSNQLTGPIPPSIGNLINLDLIDLSNLVNVENVTLYENNLFGPIPSTIGNLTKVRRLSLTFNALSGNLPVEMNKLTGLENLQLSYNKFTGYLPDDICVGGKLKNFTTTNNQFTGPVPRSLKNCSSLIRVRLDQNQLSGNITDAFGVYPNLLYIKLSENNFYGHLSPKWGKCNNLTALIVSNNNLSGGIPLELAKATNLHVLILSSNHLPGEIPKELGNLKSLIKLSISGNHISGNIPMELASLQELAILEVAANNLSGFIPPQLGGFPKLWNLNLSQNNFEGSIPVEFGQLKVLQSLDLCGNFLGGTIPLALAQLKSLEILNLSHNNLSGVIPSGFDEMLSLTTVDISYNQLEGLVPSILAFQKAPLGAFRNNKGLCGNASGLESCSTLSEKSHDHKNNKILLVVLPLTLGTLILALFVCGVKYHLRHVSSATINEHAETQPQNQFSIWSFDGKMMYENIIEATEDFDSKHLIGAGVHGCVYRAELSAGLVVAVKKLHSLQDGEMSIQKAFASEIQALTDIRHRNIVKLYGFCSHSLHSFLVYEFLEKGSVDKILRDDEQATAFDWNRRMNVIKDIANALCYMHHDCSPPIVHRYISSKNVLWDLDYVAHVSDFGTAKLLNPNSTNWTSFAGTFGYTAPELAYTMNVNEKCDVYSFGVLALEILFGKHPGDFISSLSAASSTLDAMSLIDKLDLRLPHPINPVVKEVISMTKIVVACLTESPRSRPTMDQV* 1378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0199 1377 Gene3D Ribonuclease Inhibitor 282 536 IPR032675 -
Lja5g0199 1377 Gene3D Phosphorylase Kinase; domain 1 1074 1191 - -
Lja5g0199 1377 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 142 291 - -
Lja5g0199 1377 Gene3D Ribonuclease Inhibitor 537 674 IPR032675 -
Lja5g0199 1377 Gene3D Transferase(Phosphotransferase) domain 1 1192 1377 - -
Lja5g0199 1377 Pfam Leucine Rich Repeat 116 138 IPR001611 GO:0005515
Lja5g0199 1377 SUPERFAMILY Protein kinase-like (PK-like) 1092 1377 IPR011009 -
Lja5g0199 1377 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 356 491 - -
Lja5g0199 1377 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 548 668 - -
Lja5g0199 1377 SMART LRR_typ_2 961 984 IPR003591 -
Lja5g0199 1377 SMART LRR_typ_2 326 350 IPR003591 -
Lja5g0199 1377 SMART LRR_typ_2 114 137 IPR003591 -
Lja5g0199 1377 SMART LRR_typ_2 842 865 IPR003591 -
Lja5g0199 1377 SMART LRR_typ_2 985 1008 IPR003591 -
Lja5g0199 1377 SMART LRR_typ_2 90 113 IPR003591 -
Lja5g0199 1377 SMART LRR_typ_2 721 745 IPR003591 -
Lja5g0199 1377 SMART LRR_typ_2 913 937 IPR003591 -
Lja5g0199 1377 SMART LRR_typ_2 422 446 IPR003591 -
Lja5g0199 1377 SMART LRR_typ_2 138 162 IPR003591 -
Lja5g0199 1377 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 142 291 - -
Lja5g0199 1377 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Lja5g0199 1377 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 6 150 - -
Lja5g0199 1377 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 258 387 - -
Lja5g0199 1377 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 478 591 - -
Lja5g0199 1377 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 548 668 - -
Lja5g0199 1377 ProSiteProfiles Protein kinase domain profile. 1113 1377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g0199 1377 SMART LRR_sd22_2 961 984 - -
Lja5g0199 1377 SMART LRR_sd22_2 326 352 - -
Lja5g0199 1377 SMART LRR_sd22_2 566 592 - -
Lja5g0199 1377 SMART LRR_sd22_2 230 256 - -
Lja5g0199 1377 SMART LRR_sd22_2 697 726 - -
Lja5g0199 1377 SMART LRR_sd22_2 422 448 - -
Lja5g0199 1377 SMART LRR_sd22_2 114 140 - -
Lja5g0199 1377 SMART LRR_sd22_2 162 188 - -
Lja5g0199 1377 Pfam Protein kinase domain 1115 1377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g0199 1377 Pfam Leucine rich repeat 940 998 IPR001611 GO:0005515
Lja5g0199 1377 Gene3D Ribonuclease Inhibitor 24 139 IPR032675 -
Lja5g0199 1377 Gene3D Ribonuclease Inhibitor 206 281 IPR032675 -
Lja5g0199 1377 SUPERFAMILY L domain-like 22 199 - -
Lja5g0199 1377 SUPERFAMILY L domain-like 446 737 - -
Lja5g0199 1377 SUPERFAMILY L domain-like 209 470 - -
Lja5g0199 1377 ProSitePatterns Protein kinases ATP-binding region signature. 1119 1142 IPR017441 GO:0005524
Lja5g0199 1377 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 258 387 - -
Lja5g0199 1377 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 6 150 - -
Lja5g0199 1377 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 478 591 - -
Lja5g0199 1377 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 594 1377 - -
Lja5g0199 1377 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 356 491 - -
Lja5g0199 1377 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 594 1377 - -
Lja5g0199 1377 Gene3D Ribonuclease Inhibitor 675 1034 IPR032675 -
Lja5g0199 1377 SUPERFAMILY RNI-like 679 1005 - -
Lja5g0199 1377 Gene3D Ribonuclease Inhibitor 140 205 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0199 Lja-Chr5 1769750 1780834 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0199 6 691 Receptor kinase-like Gene Family AT4G08850 35.405 1.26e-114 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lja5g0199 Pkinase 1.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0199 - - gmx:100793419 1376.3