Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0152 ATGGTGGTGGTGGATGACAACGACACTTCCGGCACCAGCAACCACCGTGCCACGCCGTCTCCGTCGCAGACCCGCCAACACCGCCACAAGGTCGAAGTCTACAATGAGATTCTTCGCCGCTTGAACGATTCCGGCAACCCTGAGGCTTTGCAACCTGGCTTCCACGATCAGCTCTGGGCTCACTTCAACCGTCTTCCCGCACGGTATGCGTTGGATGTGAATGTGGAGAGGGCGGCGGATGTTCTTATGCACAAGAGATTACTGCATTTGGCGCACGATCCTGCTAATAGGCCTTCGATTGAAGTTCGCTTGGTGCAGGTTCATCCCACATCTGATGGAAACTCAGCTGACTCTTTCCACTCTGATTCTCCTGGGACAGAATCTGGTCAAAGCTCTTCAAAGTACTCAAGCAGACAGAGCATACATCCACCTCCTGCGTTTGGTTCTTCCCCTAATCTTGAAGCACTGGCTCTTGAAGAAAATAACTCTGAAGACATAGATGAAAGATCTGTACATGCCAGTGTACAATATTCACGGCCCATGCATGAAATCACTTTCTCAACGGAAGACAAGCCAAAGCTTCTCAGTCAGTTAACTGCTTTGCTTGCTGAGATTGGACTGAACATCCAAGAGGCACATGCCTTTTCCACTTCCGATGGTTACTCATTAGATGTCTTTGTTGTTGATGGATGGCCCTATGAGGAAACAGAGAAGTTAAAAGTAGCTTTGGAAAAAGAAATCTTGAAGATTGAGAGGCAGGCGAGGTCCAATCAACAATCAGTATCGTCTGCTGATGAGCCTGATCAAGCAAGGATGAAACATGAACAGGATCATCTTACAATTCCAAATGATGGGACAGATGTTTGGGAAATAGATGCAAAACACTTGACATATGGAAATCAAATTGCATCTGGGTCATATGGTGAACTATTTAAAGGTACATATTGTAGTCAGGAAGTAGCCATCAAAGTTCTCAAGGGTGAGCATGTAAATGCAGAAATGCAGAGAGAGTTCGTGCAGGAAGTCTATATCATGAGAAAGGTTCGACACAAGAATGTTGTACAATTCATAGGAGCATGTACCAAGCCTCCTCGCTTATGCATAATAACAGAATTTATGTCTGGTGGAAGTGTGTATGACTACTTGCATAAGCAGAAGGGTTTTTTTAAATTTCCTTCCCTGCTCAAAGTTGCAATTGATGTTTCTAAAGGGATGAACTACTTGCATCAACATAACATAATCCATAGAGACTTGAAGGGAGCCAATCTTTTGATGGATGAAAATGGTGTTGTAAAGGTGGCTGATTTTGGGGTTGCTAGAGTGAAAGCTCAATCTGGAGTTATGACTGCAGAAACTGGGACATATCGGTGGATGGCTCCTGAGGTCATAGAACACAAGCCCTACGATCACAAGGCTGATGTATTTAGTTTTGGAGTTGTTTTATGGGAGTTGCTCACTGGAAAGCTTCCGTACGAATATTTGACTCCTCTGCAGGCAGCTATAGGAGTGGTTCAAAAGGGCCTGCGGCCCACCATTCCCAAGAACACTCATCCAAAGTTTGTTGAGCTTCTTGAGAGGTCTTGGCAGCAAGATTCAACATTGAGACCCGATTTCTCTGAAATTATTGACATCCTGCAGAAGCTAGCTAAGGAGGTTGGCGATGATGGAGAGGATCGGCGCAGGGACAAATCGGGAGGATTTCTGTCAGCCCTTAGGCGTGGTCATCACTGA 1731 0.4558 MVVVDDNDTSGTSNHRATPSPSQTRQHRHKVEVYNEILRRLNDSGNPEALQPGFHDQLWAHFNRLPARYALDVNVERAADVLMHKRLLHLAHDPANRPSIEVRLVQVHPTSDGNSADSFHSDSPGTESGQSSSKYSSRQSIHPPPAFGSSPNLEALALEENNSEDIDERSVHASVQYSRPMHEITFSTEDKPKLLSQLTALLAEIGLNIQEAHAFSTSDGYSLDVFVVDGWPYEETEKLKVALEKEILKIERQARSNQQSVSSADEPDQARMKHEQDHLTIPNDGTDVWEIDAKHLTYGNQIASGSYGELFKGTYCSQEVAIKVLKGEHVNAEMQREFVQEVYIMRKVRHKNVVQFIGACTKPPRLCIITEFMSGGSVYDYLHKQKGFFKFPSLLKVAIDVSKGMNYLHQHNIIHRDLKGANLLMDENGVVKVADFGVARVKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGVVLWELLTGKLPYEYLTPLQAAIGVVQKGLRPTIPKNTHPKFVELLERSWQQDSTLRPDFSEIIDILQKLAKEVGDDGEDRRRDKSGGFLSALRRGHH* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0152 576 Gene3D Phosphorylase Kinase; domain 1 286 374 - -
Lja5g0152 576 PANTHER SERINE/THREONINE-PROTEIN KINASE STY46-LIKE ISOFORM X1 16 558 - -
Lja5g0152 576 ProSiteProfiles Protein kinase domain profile. 296 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g0152 576 MobiDBLite consensus disorder prediction 553 576 - -
Lja5g0152 576 Coils Coil 233 253 - -
Lja5g0152 576 ProSiteProfiles ACT domain profile. 183 258 IPR002912 -
Lja5g0152 576 Pfam Protein tyrosine and serine/threonine kinase 297 544 IPR001245 GO:0004672|GO:0006468
Lja5g0152 576 CDD STKc_MAP3K-like 302 545 - -
Lja5g0152 576 MobiDBLite consensus disorder prediction 109 151 - -
Lja5g0152 576 MobiDBLite consensus disorder prediction 109 146 - -
Lja5g0152 576 PRINTS Tyrosine kinase catalytic domain signature 370 383 IPR001245 GO:0004672|GO:0006468
Lja5g0152 576 PRINTS Tyrosine kinase catalytic domain signature 472 494 IPR001245 GO:0004672|GO:0006468
Lja5g0152 576 PRINTS Tyrosine kinase catalytic domain signature 453 463 IPR001245 GO:0004672|GO:0006468
Lja5g0152 576 PRINTS Tyrosine kinase catalytic domain signature 516 538 IPR001245 GO:0004672|GO:0006468
Lja5g0152 576 PRINTS Tyrosine kinase catalytic domain signature 407 425 IPR001245 GO:0004672|GO:0006468
Lja5g0152 576 CDD ACT_TyrKc 181 248 - -
Lja5g0152 576 SUPERFAMILY ACT-like 181 245 IPR045865 -
Lja5g0152 576 ProSitePatterns Serine/Threonine protein kinases active-site signature. 413 425 IPR008271 GO:0004672|GO:0006468
Lja5g0152 576 Gene3D - 180 253 - -
Lja5g0152 576 SUPERFAMILY Protein kinase-like (PK-like) 282 545 IPR011009 -
Lja5g0152 576 Gene3D Transferase(Phosphotransferase) domain 1 375 564 - -
Lja5g0152 576 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 16 558 - -
Lja5g0152 576 MobiDBLite consensus disorder prediction 1 28 - -
Lja5g0152 576 MobiDBLite consensus disorder prediction 1 21 - -
Lja5g0152 576 SMART serkin_6 296 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g0152 576 MobiDBLite consensus disorder prediction 553 569 - -
Lja5g0152 576 MobiDBLite consensus disorder prediction 254 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0152 Lja-Chr5 1291814 1298857 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0152 8 575 MAP Kinase Kinase Kinase AT4G35780 66.373 0.0 761
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lja5g0152 PK_Tyr_Ser-Thr 4.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0152 - - gmx:100805180 971.459