Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0150 ATGGCGCCGCGTGGAAGGCCGAAGCGGCAACCAACACATGTTCCGGCTGAGAATGTTGGTGGGGTAGCAGATTCTTCTGTTCCAGAGGAAGAGATGAAGGAAAAAATTGATGGGTCGGTGGTGGTTGACAAGGAGGAACAACCCGTTTCAAATCATGACTTGGGTGTTCATGGGGGTGCTGGTGCTAAGAAAGTGAAGTTTGCAGAGGGTGTTGAGTTTTTGAATGGGGAAGGTTCTGGTAAAGATGGTGGTGTTGAAGAAGCAGGTCCTTCTTCTGCTCCTGTTGAAGTTGGTGAGAAAAAGAGGCGTGGCAGAAAGCCTAAAGTGAAACAACCCATTTCAAATCAAGACTTGGGTGTTGATGGTGGTGCTAAAGAAGTGAGCTCTGTAGAGGGAGTTGAGTTTTTGAACGGTGAAGGTTCAGGTAAAGATGGTGGTGGTGGAGAAGGAGGTCCTTCTTCTGTTTCTGTTAAGGTTGTTGTGGGAAAGAAGCGTGGCAGAAAGCCTAAAGGGAAAAGGGTGGCCAGGAAGAAGGTGGATGGGGGTGTTATGGAGCAGAGGGGGAGTAACAAGAAGGAACAACCCATTTCAAATCAAGACTTGGGTGTTGATGGAGGTGCTAAGAAAGTCAGCTTTGTAGAGGGTGTTGAGTTTTTGAACGGTGAAGGTTCGGGTAAAGATGATGGTGGTGTGGGAGAAGGAGGTCCTTTTTCTGCTTCTGTTCAAGATGGTGAGAAAAAGAGGCGTGGCAGAAAGCCTAAAGTGGAAAGGGAGGCCTTGAAGGTGGATGGGGGTGTTATGGAGCAGAGGGGGAGTAACAAGGAGGAACAACCCATTTCAAATCAAGACTTGGGTGTTGATGGAGGTGCTAAGAAAGTGAGCTTTGTAGAGGGTGTTGAGTTTTTGAACGGTGAAGGTTCGGGTAAAGATGATGGTGGTGTGGGAGAAGGAGGTCCTTCTTCTGATTCTGTTCAAGATGGTGAGAAAAAGAGGCGTGGCAGAAAGCCTAAAGTGGAAAGGGAGGCCATGGAGAAGGTGGATGGGGGTGTTACAGTCCTTATGGAGCAGAGGCGTAGTAGCAGACAAAAGAGGAAGATCTTTGTGATGGATTATATCGACGAGGAAGAAGATGTTGAGGGCAGAAAAATGAAGAAACGAGGTCGGAAGAAAGAAGCGAAGGCCATTTACGAAGTTGGGTCTAGTTCTAAGGTAAGTGGAGGAAATAAGAGAGGTCCTAAGCCGCGCAAAGCTGCAGTTAGTGAGGGAAAGGTTGAATCTAATGGGAGTGAAGTCAACAAACAGGAGTTGCCAAAAATCAACAAGTTTGATCCTAAGTGGATTGAAGAGGAGTCCTTAATGTGCCATCAATGTCAAAGAAATGATAAAGGCCGGGTTGTGAGGTGCAAGAATTGTAAACGGAAAAGATTTTGCATTCCCTGTTTGAAGCAATGGTACCCTAACTGGAACGAGGATGATATTGCTAAGGCATGTCCTGTGTGCCAAGGTAATTGCAACTGCAAAGCTTGCATGCGTTCTGGTAATCTTCTTGAAAAAGTGAAGGATGAAGGAGCAACCAATGAAGGCAATAAGGTGGAGCTCAATAAGTATCTGCTGAAGCATCTTCTTCCGTATTTAAGACAGTTGGATGAAGAACAAAAGATGGAGAAGGAGATAGAAGCTAATAGACAAGGGCTCTCACTCTCAGAGCTGAAAATAGAAGATGCAGATATCGCTAATGAGCGCGTGTACTGTGACAACTGCAAAACATCAATATTTGATTACCACAGAAGCTGTACAAAATGCTCGTTTGACCTTTGTCTTATCTGCTGCCGTGAGCTACGCAGTGGGCAACTTCTTGGTGGTGCAGATCCAGTTCAGCTGGAGTTTGTCTTCCGTGGTCGTGGTTATTTGCATGGTAAAAAAGAGGATAAAGAGGTAACTCAAAATATATCACTTACAGACGCGGTTCAATGGTCAAGATCTGAGTGGCATGCTCACAGTGATGGTAGCATTCCCTGTCCAAAAGCCAATCATGAGAGTAACCATGGTTTTCTTGAGCTGAGAAGCATATGTTCTCGTCCTGGCTTATCAAAAAAAAAGAAATGTTCTCATCCTTATTCCATCTCTGAGTTAGTATGTAAAGCTGAAGAACTTGCAAAAGCATATAAGGTTCAAGATGATGGGGATACTCTTGATAACTGCTGTTCTTGCTTGAAGCTTGATAGAAACACAGATGGTGAATCTATTTATATGAGGAAGGCAGCTTCTCGTGAAGATTCCAGTGACAACTGTTTATACTGTCCTAGCGCTGTTGACCTACAGCATGAGGACTTTAGACATTTTCAATTGCATTGGAGCAAAGGCGAGCCTGTAATTGTTAGCAATGTTCTTGAACATGCATCTGGTTTAAGCTGGGAGCCTCTTGTCATGTGGCGTGCATTCCGTCAGATGTTTAAGACCAAGCACGATAGACATTTGGATGTGAAGGCAATTGATTGTTTAGATTGGTGTGAGGGAGAGATTAATATCCACCAGTTCTTTACTGGGTATACAAATGGTCGTGATGATTGGCTCGATTGGCCTCAGATATTGAAATTAAAAGATTGGCCACCTTCTAATTTATTTGAGGAACGTTTACCTCGTCACTGTGCTGAATTCATATCTTCCTTACCCTTTAAAGAATATACGAATCCATACAAAGGTGCTCTTAACCTGGCTGTGAAGTTGCCCAAGGGTTGTATAAAGCCAGACATGGGTCCAAAGACATATATTGCCTATGGATTTGCTCAGGAGCTTGGGCGTGGTGATTCTGTGACTAAGCTTCATTGTGATATGTCTGATGCTGTAAATGTGTTGACGCATGTTGCTGAAGTTCAATTGAAACCTAATAACATCACTGCTATTGCTAAGCTGATGCGAAGCCACCTCGAGCAAGACAAAAAGGAGCTACTTACAGATAGTCAGGATGGAGAAACTAATGTTGACACGCCTGATAATTCATCCTCTACCATAAATCCCCCATACGAGCAAAATAATGTCGTAGTCTTGGAAAATAAAGGTGAACTATTTGATGGGAAAGTGACAATGAAAGACGAAAATGGTATAATGGTTGCTGGGGATGCTTTAGGAGGCGCTCTTTGGGATATTTTTAGGAGACAGGATGTACCTAAGTTGCAGGAGTACTTAAAAAAGCATTTCAGAGAGTTCAGGCATGTCCACTGCAGTCCTTTAACGAAGGTTGTTCATCCCATCCATGATCAGACCTTTTATTTGACTATGGAGCATAAGAGGAAGCTTAAGGAGGAGTATGGAATTGAGCCGTGGACTTTTGTACAGAAGCTAGGCGATGCTGTTTTTATTCCAGCTGGTTGTCCTCACCAAGTTAGAAACCTGAAGTCATGCATTAAGGTTGCTCTTGATTTTGTGTCGCCTGAAAATGTTGGTGAGTGCTTCCGTTTAGCAGAAGAGTTTCGCACGCTTCCCATAAATCACAGGTCGACTGAGGATAAATTGGAGGTGAAGAAAATGACTTTGCATGCTATGATTGATGTGGTCCAAAACTTGGAGAAAGCAAGGTCCAGGGAGACCAAGGTTCCATCTTAA 3603 0.4396 MAPRGRPKRQPTHVPAENVGGVADSSVPEEEMKEKIDGSVVVDKEEQPVSNHDLGVHGGAGAKKVKFAEGVEFLNGEGSGKDGGVEEAGPSSAPVEVGEKKRRGRKPKVKQPISNQDLGVDGGAKEVSSVEGVEFLNGEGSGKDGGGGEGGPSSVSVKVVVGKKRGRKPKGKRVARKKVDGGVMEQRGSNKKEQPISNQDLGVDGGAKKVSFVEGVEFLNGEGSGKDDGGVGEGGPFSASVQDGEKKRRGRKPKVEREALKVDGGVMEQRGSNKEEQPISNQDLGVDGGAKKVSFVEGVEFLNGEGSGKDDGGVGEGGPSSDSVQDGEKKRRGRKPKVEREAMEKVDGGVTVLMEQRRSSRQKRKIFVMDYIDEEEDVEGRKMKKRGRKKEAKAIYEVGSSSKVSGGNKRGPKPRKAAVSEGKVESNGSEVNKQELPKINKFDPKWIEEESLMCHQCQRNDKGRVVRCKNCKRKRFCIPCLKQWYPNWNEDDIAKACPVCQGNCNCKACMRSGNLLEKVKDEGATNEGNKVELNKYLLKHLLPYLRQLDEEQKMEKEIEANRQGLSLSELKIEDADIANERVYCDNCKTSIFDYHRSCTKCSFDLCLICCRELRSGQLLGGADPVQLEFVFRGRGYLHGKKEDKEVTQNISLTDAVQWSRSEWHAHSDGSIPCPKANHESNHGFLELRSICSRPGLSKKKKCSHPYSISELVCKAEELAKAYKVQDDGDTLDNCCSCLKLDRNTDGESIYMRKAASREDSSDNCLYCPSAVDLQHEDFRHFQLHWSKGEPVIVSNVLEHASGLSWEPLVMWRAFRQMFKTKHDRHLDVKAIDCLDWCEGEINIHQFFTGYTNGRDDWLDWPQILKLKDWPPSNLFEERLPRHCAEFISSLPFKEYTNPYKGALNLAVKLPKGCIKPDMGPKTYIAYGFAQELGRGDSVTKLHCDMSDAVNVLTHVAEVQLKPNNITAIAKLMRSHLEQDKKELLTDSQDGETNVDTPDNSSSTINPPYEQNNVVVLENKGELFDGKVTMKDENGIMVAGDALGGALWDIFRRQDVPKLQEYLKKHFREFRHVHCSPLTKVVHPIHDQTFYLTMEHKRKLKEEYGIEPWTFVQKLGDAVFIPAGCPHQVRNLKSCIKVALDFVSPENVGECFRLAEEFRTLPINHRSTEDKLEVKKMTLHAMIDVVQNLEKARSRETKVPS* 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0150 1200 MobiDBLite consensus disorder prediction 1 35 - -
Lja5g0150 1200 MobiDBLite consensus disorder prediction 161 175 - -
Lja5g0150 1200 MobiDBLite consensus disorder prediction 984 1007 - -
Lja5g0150 1200 MobiDBLite consensus disorder prediction 219 288 - -
Lja5g0150 1200 ProSiteProfiles JmjC domain profile. 898 1158 IPR003347 -
Lja5g0150 1200 MobiDBLite consensus disorder prediction 989 1007 - -
Lja5g0150 1200 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 449 514 IPR018866 -
Lja5g0150 1200 ProSiteProfiles Zinc finger RING-type profile. 454 501 IPR001841 -
Lja5g0150 1200 SMART cupin_9 879 1158 IPR003347 -
Lja5g0150 1200 MobiDBLite consensus disorder prediction 242 270 - -
Lja5g0150 1200 MobiDBLite consensus disorder prediction 74 205 - -
Lja5g0150 1200 MobiDBLite consensus disorder prediction 400 431 - -
Lja5g0150 1200 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 198 1191 IPR045109 GO:0032454|GO:0033169
Lja5g0150 1200 MobiDBLite consensus disorder prediction 301 343 - -
Lja5g0150 1200 Pfam JmjC domain, hydroxylase 1043 1141 IPR003347 -
Lja5g0150 1200 Gene3D Cupin 764 1167 - -
Lja5g0150 1200 MobiDBLite consensus disorder prediction 323 343 - -
Lja5g0150 1200 SUPERFAMILY Clavaminate synthase-like 775 1183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0150 Lja-Chr5 1247701 1267235 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Lja5g0150 JmjC 2.1e-15 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0150 K15601 - gmx:100805723 1170.22