Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0148 ATGATGTTGATGCATTGCCATGAATTGTGCAAGCCAGTCTCTATTATGATTATAGTTAACTTAGCTATGGCTTTAGTCAATGTACTTATGAAGAAGGTTCTTAGTGAAGGAATGGACTACATGTCCATTGTAACATATAGACAAGCAATTTCATTTATCTTCATGGCACTTATTGCTTGTTTCTATGAAAGGAAACACAAACTGGAGGCTCACATAATATGTCTCCTTTTTCTCTCTGCTCTAGTCGGAGTTACACTCCCTCAATACCTGTTTCTTCTTGGACTTGAATACACTTCTGCCACATTCTCATGTGCATTCCTCAACATGGTGCCAGTATTTACATTCATTATGGCGCTGCCATTTGGGATAGAGAAGGTGAACATGAAAAGCAAGAGTGGTAAAGCCAAAGTCTTGGGAACTTTTATGTGCATATGTGGAGCTTTGTTATTGGCTCTCTATAAAGGAATACCCTTGATCAACTCCCAATCACAAGACATGGCAAACAAAGCTGCAAGCACAACCCGAGATGCCTCAACAGAGAAATGGATTATAGGCTCAACCCTTCTAACTGCAGGCTGCCTCTTCTGGAGTTCTTGGTTTATCATACAAGCAAAGATTAGCAAAAGTTATCCATGCCAATACTCTAGCACAGCTATTTTGTCACTTTTTGCTGCCATTCAATCAGCAATAGCAACTTTGGTCATGAGGAGAAATAATGCCTCATGGATCCTCAAAGGAAAGCTAGAAATAATGAGTGTTATATATTCTGGATTAGTGGGATCAGGTTTGTGCTATGTGGCTATGTCATGGTGTGTCAAACAAAGGGGTCCAGTTTTTACTGCAGCATTTAGCCCCTTGATACAGATATTTGTGGCTGTGCTTGATTTTACTATACTAAAAGAGGAGATTTACATGGGAAGTGTTGCAGGATCAGTCTTGGTCATTGCTGGCATGTATATTCTTCTATGGGGAAAAAGTAAAGAGGGAGAGCAGTGTGTCCTGAAGGATACACAAACAAATCAAGATGTAGAATGTCAATAA 1041 0.3967 MMLMHCHELCKPVSIMIIVNLAMALVNVLMKKVLSEGMDYMSIVTYRQAISFIFMALIACFYERKHKLEAHIICLLFLSALVGVTLPQYLFLLGLEYTSATFSCAFLNMVPVFTFIMALPFGIEKVNMKSKSGKAKVLGTFMCICGALLLALYKGIPLINSQSQDMANKAASTTRDASTEKWIIGSTLLTAGCLFWSSWFIIQAKISKSYPCQYSSTAILSLFAAIQSAIATLVMRRNNASWILKGKLEIMSVIYSGLVGSGLCYVAMSWCVKQRGPVFTAAFSPLIQIFVAVLDFTILKEEIYMGSVAGSVLVIAGMYILLWGKSKEGEQCVLKDTQTNQDVECQ* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0148 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 227 327 - -
Lja5g0148 346 PANTHER WAT1-RELATED PROTEIN 10 344 IPR030184 GO:0016021|GO:0022857
Lja5g0148 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
Lja5g0148 346 Pfam EamA-like transporter family 185 322 IPR000620 GO:0016020|GO:0016021
Lja5g0148 346 Pfam EamA-like transporter family 13 151 IPR000620 GO:0016020|GO:0016021
Lja5g0148 346 PANTHER WAT1-RELATED PROTEIN 10 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0148 Lja-Chr5 1239664 1241784 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0148 8 256 Nodulin-like Gene Family AT3G30340 48.207 4.41e-82 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0148 - - gmx:100802053 586.26