Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0122 ATGGCAGATGTGAAACTACTAGGATTTTGGTCAAGCCCTTTTGTTCATAGAGTCATATGGGCTTTGAAATTCAAGGGTATAAGCTATGAGTATATTGAACAAGACAGGTACACCAAAAGCCAACTACTTCTACAATCCAATCCAGTTCACAAGAAAGTCCCTGTGCTCATCCATGGAGGCAGAGCCATCGCAGAGTCTCTTGTGATTCTTGAATACATTGAAGAAACATGGCCACAAAAGCCATTGCTGCCACAGGATAACCATGAGAGAGCCTTAGCTCGATTTTGGATTAAATTTGGAGAAGATTCGCTCGTTTCTATAACTGATTTGTTTCTCCGGCCCTCAAAAGATGAACAAGAAAGAGCAAGTGCAGTGAAAAAAGCACAAGAAAAAATCACAATTATGGAAGAGCAAGGTCTAGGGGTCAAGAAGTTCTTTGGAGGCAACAACATTAGTATGGTGGACTTAGCATATGGGTGCCTTAGTCATTGGTTAGAAGGCTTAGAGGAACTTGCTGGGATGAAACTTATTGAGCCAAACAAGTTTACTAGGTTGCATGCTTGGATGCAAAATTTTAAACAAGTTCCCCTGATTAAAGAAAACCTTCCTGATTATGGGAAACTGTTGCTCCACCTTGAAAGGCGCAGGCAGGAATATTACTAG 663 0.4118 MADVKLLGFWSSPFVHRVIWALKFKGISYEYIEQDRYTKSQLLLQSNPVHKKVPVLIHGGRAIAESLVILEYIEETWPQKPLLPQDNHERALARFWIKFGEDSLVSITDLFLRPSKDEQERASAVKKAQEKITIMEEQGLGVKKFFGGNNISMVDLAYGCLSHWLEGLEELAGMKLIEPNKFTRLHAWMQNFKQVPLIKENLPDYGKLLLHLERRRQEYY* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0122 220 SFLD Main.3: Omega- and Tau-like 1 218 IPR045073 -
Lja5g0122 220 CDD GST_N_Tau 4 77 - -
Lja5g0122 220 SFLD Main (cytGST) 1 218 - -
Lja5g0122 220 CDD GST_C_Tau 88 215 IPR045074 GO:0004364|GO:0006749
Lja5g0122 220 SUPERFAMILY Thioredoxin-like 3 104 IPR036249 -
Lja5g0122 220 PANTHER GLUTATHIONE TRANSFERASE GST 23-LIKE 1 216 - -
Lja5g0122 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 216 IPR045073 -
Lja5g0122 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Lja5g0122 220 Pfam Glutathione S-transferase, N-terminal domain 3 74 IPR004045 -
Lja5g0122 220 Gene3D Glutaredoxin 1 82 - -
Lja5g0122 220 Gene3D - 83 219 - -
Lja5g0122 220 SUPERFAMILY GST C-terminal domain-like 75 217 IPR036282 -
Lja5g0122 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 219 IPR010987 -
Lja5g0122 220 Pfam Glutathione S-transferase, C-terminal domain 113 193 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0122 Lja-Chr5 1089446 1090843 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0122 3 214 Glutathione S-transferase Gene Family AT2G29460 43.318 8.47e-58 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0122 K00799 - gmx:547586 380.563