Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0111 ATGGAAGACATGAGTGGTGGTTCAGCAACAGCAACAGCAACAGCAACAGCAATCAACTCTTCCAATATAGGGTTTCAGCTATTGAAGAAGCAAGGTTGGAAAGAAGGGACTGGTCTTGGGATATCTGAGCAGGGTAGACTAGAACCCGTGGAAACTCGTGTGAAGAATAACAAGCGAGGTTTGGGGGCGGACAAAGTGAAGAAAATGGCCGTGAAGTCTGATGATAGTGATGCCTCTAAAGGGAACAAGCAGCAGGAAAACTCGTCTCAAAAGAAAAAAACCAAAGCACTCTCTAAACGGATGAGAAAGATGCAGGAGTATGAAAAGCAGATGGAGGAGAAGGAATTTGAGCGCGCATTCTTTAGAGAGTTCTGGCCAGAAAATGTGTAA 390 0.4487 MEDMSGGSATATATATAINSSNIGFQLLKKQGWKEGTGLGISEQGRLEPVETRVKNNKRGLGADKVKKMAVKSDDSDASKGNKQQENSSQKKKTKALSKRMRKMQEYEKQMEEKEFERAFFREFWPENV* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0111 129 ProSiteProfiles G-patch domain profile. 20 66 IPR000467 GO:0003676
Lja5g0111 129 MobiDBLite consensus disorder prediction 36 106 - -
Lja5g0111 129 SMART G-patch_5 18 64 IPR000467 GO:0003676
Lja5g0111 129 MobiDBLite consensus disorder prediction 48 93 - -
Lja5g0111 129 Pfam G-patch domain 21 63 IPR000467 GO:0003676
Lja5g0111 129 PANTHER BAT4 PROTEIN-RELATED 5 129 IPR039146 -
Lja5g0111 129 Coils Coil 97 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0111 Lja-Chr5 988294 990252 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0111 18 62 C2H2 Transcription Factor Family AT5G26610 53.333 4.43e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0111 - - cam:101497292 180.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0111 5 988294 990252 Lja5g0111 5 988294 990252 ECH