Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0091 ATGGTATCAAGGGGGCTGTTTGGGTGGTCCCCACCGCACATGCAGCCACTCACGCCGGTCTCCGAGGTGTCAGAGCCGCCGGAGTCGCCGTCGCCTTTCATGGACTTCGGCGCCGAGACCTCCGCGTCGCAGCAGGTGGAGGAGGATGAGGAGATGGAGGAGCAAGAGGAGGACGAGCCGCCGCCAGCTGCCGTTCCTTTCTCGCGGCTGTTCGCCTGCGCTGACCGTCTCGACTGGGTCCTTATGGTGGTTGGCTCCGTCGCCGCCGCCGCTCATGGCACCGCGCTTGTGGTTTACTTGCACTACTTTGCTAAAGTTCTCCAGGTTCCTATGCAGGAGGATCAGTTTCCCAGGTTCAAGGAGCTTGCTTTAAACATTGTTTATATTGCTGGGGGAGTTTTCGTTGCTGGTTGGATTGAGGTTTCGTGTTGGATACTTACTGGAGAACGGCAGACAGCTGTCATCAGATCAAAATATGTTCGAGTATTACTTAATCAAGACATGAGTTTTTTTGATACTTACGGGAATAATGGAGACATTGTGAGTCAAGTATTGAGTGATGTGCTGCTCATTCAGTCTGCTCTTAGTGAAAAAGTTGGGAATTATGTTCATAATATGGCTACATTCTTCAGTGGTCTAGTTATTGCTTTTATCAATTGTTGGCAGATTGCATTGATAACATTAGCTACAGGTCCTTTTATTGTTGCTGCAGGAGGAATTTCAAACATATTCCTCCATAGGCTTGCAGAGAATATTCAAGATGCATATGCTGAAGCAGCCAGCATTGCTGAACAGGCAGTTTCCTATATAAGGACCTTGTATGCATTTACAAATGAGACATTAGCTAAATATTCATATGCAACATCCCTGCAAGCCACTCTTAGATATGGTATATTAATAAGTCTTGTCCAAGGGCTTGGCCTTGGGTTTACATATGGGCTTGCAATATGTTCTTGTGCATTGCAACTCTGGGTCGGAAGGTTATTGGTTGTGCATGGAAAAGCTCATGGTGGTGAAATTGTAGCGGCTCTTTTTGCTGTGATTCTGAGTGGCTTGGGATTGAATCAAGCAGCAACAAATTTCTACTCATTTGATCAAGGGCGAATAGCTGCTTATAGACTCTTTGAGATGATAAGCCGGTCATCCTCATCTTCAAATCATGAAGGCAGTTCTCCTGCCTCTGTACAAGGAAACATAGAGTTTCGGAATGTTTATTTCAGTTATCTTTCTCGCCCTGAAATCCCTATTTTGAGTGGGTTTTATCTCACGGTTCCTGCTAAGAAAACTGTGGCACTTGTTGGCAGAAATGGCTCTGGAAAGAGCAGTATTATTCCACTTATGGAGCGGTTCTATGATCCAACATTAGGAGAAGTTCTTTTAGATGGTGAAAACATCAAGAATTTGAAACTGGAATGGCTGAGGAGCCAAATAGGACTGGTAACCCAGGAACCGGCTTTGCTCAGTTTGAGCATAAAAGACAACATTGCTTATGGCAGGGAGACCACCTCTGATCAAATTGAAGAGGCTGCTAAAATAGCTCATGCACATACCTTTATCAGCTCCCTAGATAAAGGTTATGATACTCAGGTTGGCAGGGCGGGTTTAGCTTTGACAGAAGAGCAAAAAATAAAACTTTCTATTGCAAGAGCTGTGCTTTTAAATCCATCCATTCTTCTGCTTGATGAGGTTACCGGTGGACTTGATTTTGAGGCTGAGAGGTCTGTTCAGGATGCCCTGGATCTCCTTATGCTGGGACGCTCAACAATAATAATTGCTCGAAGGCTTAGTCTTATAAAGAATGCTGATTATATAGCTGTTATGGAGGAGGGTCAGCTTGTTGAAATGGGTACTCATGATGAATTATTGACCCTAGATGGCTTATATGCAGAGCTTCTTCGATCTGAAGAGGCCACAAAACTTCCCAAGAGGATGCCTGTTCGAAACTACAAGGAGACTGCAGCTTTCCAAATTGAGAAAGATTCTTCAGAAAATCATAGCTTCAACGAACCATCATCCCCTAGAATGGTGAAATCACCCTCTCTTCAAAGAATATCTGCAGTATTTCGGCCTTCAGAGGGCTTCTTTAACTCACAAGAATCACCCAAAGTTCGGAGCCCACCACCCGAGAAGATGATGGAAAATGGTCAGTCTTTGGAGGCAGAAGATAAAGAGCCATCAATAAAAAGGCAGGATAGTTTCGAAATGAGACTACCAGACTTACCGAAGATTGATGTTCAGTCTTTGCATCGACAAACATCAAATGGTTCTGACCCTGAATCCCCTGTTTCACCTCTTTTAACATCTGATCCTAAAAATGAACGCTCCCATTCACAGACTTTTAGCAGACCAGATAGTTATTCTGATGATTTTCCAGTGAAAGCAAATGCAACAAAGGATACACTGCATCAAGAACAACCCTCAATTTGGAGGTTGGCAGAGCTTAGTTTTGCAGAGTGGCTTTATGCGGTGTTAGGAAGCATAGGTGCTGCTATCTTTGGTTCCTTCAATCCTCTTCTTGCTTATGTCATTGGCCTGGTGGTGACAGCTTACAACAAAATTGATGAAACTCATCACTTGCAAGGGGAGATAGACAAATGGTGCTTGCTCATTGCTTGTATTGGTATTGTGACCGTCATTGCCAACTTCTTACAACATTTCTACTTTGGTATTATGGGGGAGAAAATGACAGAAAGAGTTAGGAGAATGATGTTCTCAGCCATGCTACGCAATGAAACTGGATGGTTCGATTTAGAAGAAAATAGTGCTGACAATTTATCCATGCGCTTGGCCAATGATGCGACATTTGTGCGAGCTGCTTTCAGTAACCGACTTTCCATATTTGTACAGGACAGTGCGGCAGTTATTGTTGCTTTTCTCATTGGTGTTTTGCTGCACTGGCGATTAGCACTTGTGGCTTTAGCAACACTTCCAATTCTCTGTGTTTCTGCTGTTGCCCAGAAATTGTGGCTTGCTGGATTTTCAAGGGGCATCCAGGAAATGCACCAAAAGGCATCTTTGGTTCTTGAAGATGCAGTCAGAAATATTTACACCGTTGTTGCATTTTGTGCTGGTAATAAGGTGATGGAACTCTACAGGCTGCAGTTAAATAAAATATTTAAGCAGAGTTTTCTTCACGGACTGGCCATTGGTTTTGCATTTGGCCTTACACAGTTTCTACTTTTTGCCTGTAATGCCCTTCTACTTTGGTACACTGCAATATGTGTACATAGAGATTATGCGGATACTCCCACTGCGATCAAGGAGTACATGATTTTCTCATTTGCTACATTTGCGCTTGTGGAACCCTTTGGACTGGCTCCTTACATACTCAAGCGAAGAAAATCTCTCATTTCAGTATTTGAAATCATAGATCGCGTGCCTAAAATTGATCCTGATGACAATGAAGCATTGAAGCCACCTAATGTATATGGAAGCATTGAGTTGAAAAATGTTGATTTTTGTTATCCTTCTAGGCCAGAAGTCTTGGTATTGAGCAATTTTAGTCTCAAAGTCAGTGGGGGGCAAACAATTGCTGTTGTGGGAGCTTCAGGGTCAGGAAAAAGCACTATAATATCTTTGATGCAGAGATTTTATGATCCAGTTGCTGGTCAAGTTTTACTAGATGGGAGAGATTTAAAACTGTATAACTTGAGATGGTTGAGAAGCCACCTTGGTCTGGTTCAGCAGGAACCTATTATCTTCTCGACAACTGTAAGGGAAAATATCATATATGCCAGACATACTGCCAGTGAAGCTGAAATAAAAGAGGCCGCAAGAATAGCAAATGCGCATCATTTCATTAGTAGCTTGCCTCATGGTTATGACACTCATGTTGGGATGAGAGGTGTTGACTTAACTCCAGGACAGAAACAGAGGATTGCAATTGCAAGGGTAGTGCTAAAAAATGCACCTATCTTGTTGTTGGATGAAGCTAGTTCATCAATTGAATCTGAATCAAGCAGAGTGGTGCAAGAGGCATTAGACACTCTAATAATGGGAAACAAAACCACTATTCTAATAGCACACAGGGCTGCTATGATGAGGCATGTGGACAACATTGTTGTTCTTAACGGAGGACGGATAGTTGAGGAGGGGACTCATGATTCATTGATGGCAAAGAATGGTCTGTATGGCCGATTAATGCAACCTCATTTTGGCAAGGCTATGCGTCCACATCGGCGGCTTGTTTAG 4191 0.4328 MVSRGLFGWSPPHMQPLTPVSEVSEPPESPSPFMDFGAETSASQQVEEDEEMEEQEEDEPPPAAVPFSRLFACADRLDWVLMVVGSVAAAAHGTALVVYLHYFAKVLQVPMQEDQFPRFKELALNIVYIAGGVFVAGWIEVSCWILTGERQTAVIRSKYVRVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYVHNMATFFSGLVIAFINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRLLVVHGKAHGGEIVAALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSSNHEGSSPASVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIKDNIAYGRETTSDQIEEAAKIAHAHTFISSLDKGYDTQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERSVQDALDLLMLGRSTIIIARRLSLIKNADYIAVMEEGQLVEMGTHDELLTLDGLYAELLRSEEATKLPKRMPVRNYKETAAFQIEKDSSENHSFNEPSSPRMVKSPSLQRISAVFRPSEGFFNSQESPKVRSPPPEKMMENGQSLEAEDKEPSIKRQDSFEMRLPDLPKIDVQSLHRQTSNGSDPESPVSPLLTSDPKNERSHSQTFSRPDSYSDDFPVKANATKDTLHQEQPSIWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLVVTAYNKIDETHHLQGEIDKWCLLIACIGIVTVIANFLQHFYFGIMGEKMTERVRRMMFSAMLRNETGWFDLEENSADNLSMRLANDATFVRAAFSNRLSIFVQDSAAVIVAFLIGVLLHWRLALVALATLPILCVSAVAQKLWLAGFSRGIQEMHQKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLNKIFKQSFLHGLAIGFAFGLTQFLLFACNALLLWYTAICVHRDYADTPTAIKEYMIFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDNEALKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVSGGQTIAVVGASGSGKSTIISLMQRFYDPVAGQVLLDGRDLKLYNLRWLRSHLGLVQQEPIIFSTTVRENIIYARHTASEAEIKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLMAKNGLYGRLMQPHFGKAMRPHRRLV* 1397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0091 1396 MobiDBLite consensus disorder prediction 44 60 - -
Lja5g0091 1396 Pfam ABC transporter 1164 1312 IPR003439 GO:0005524
Lja5g0091 1396 CDD ABC_6TM_Pgp_ABCB1_D2_like 818 1129 - -
Lja5g0091 1396 SMART AAA_5 426 605 IPR003593 -
Lja5g0091 1396 SMART AAA_5 1173 1360 IPR003593 -
Lja5g0091 1396 MobiDBLite consensus disorder prediction 748 785 - -
Lja5g0091 1396 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1134 1382 IPR027417 -
Lja5g0091 1396 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 399 634 IPR003439 GO:0005524
Lja5g0091 1396 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 823 1115 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lja5g0091 1396 Pfam ABC transporter transmembrane region 828 1078 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lja5g0091 1396 Pfam ABC transporter transmembrane region 84 349 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lja5g0091 1396 SUPERFAMILY ABC transporter transmembrane region 810 1131 IPR036640 GO:0005524|GO:0016021
Lja5g0091 1396 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1146 1383 IPR003439 GO:0005524
Lja5g0091 1396 Gene3D ABC transporter type 1, transmembrane domain 936 1135 IPR036640 GO:0005524|GO:0016021
Lja5g0091 1396 CDD ABC_6TM_Pgp_ABCB1_D1_like 82 374 - -
Lja5g0091 1396 Gene3D ABC transporter type 1, transmembrane domain 69 650 IPR036640 GO:0005524|GO:0016021
Lja5g0091 1396 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 391 633 IPR027417 -
Lja5g0091 1396 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 83 366 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lja5g0091 1396 PANTHER ABC TRANSPORTER B FAMILY MEMBER 20-RELATED 19 1391 - -
Lja5g0091 1396 Pfam ABC transporter 420 564 IPR003439 GO:0005524
Lja5g0091 1396 Gene3D - 1136 1383 IPR027417 -
Lja5g0091 1396 Gene3D - 389 636 IPR027417 -
Lja5g0091 1396 PANTHER ABC TRANSPORTER B FAMILY 19 1391 - -
Lja5g0091 1396 MobiDBLite consensus disorder prediction 748 792 - -
Lja5g0091 1396 Coils Coil 245 265 - -
Lja5g0091 1396 MobiDBLite consensus disorder prediction 1 64 - -
Lja5g0091 1396 MobiDBLite consensus disorder prediction 655 728 - -
Lja5g0091 1396 SUPERFAMILY ABC transporter transmembrane region 68 374 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0091 Lja-Chr5 859357 868929 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0091 58 683 Calmodulin-binding Proteins AT2G36910 44.062 1.41e-162 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0091 K05658 - gmx:100799399 2491.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0091 5 859357 868929 Lja5g0091 5 859357 868929 ECH