Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0063 ATGTCTATTATCACATCAAAACCTTCATTTCCCTTTTCTGCTACTTGTAGAATAAAACCATTTGCAATGTCTTCGTTTGAGTCCTTTCCCGGATTCAAATTCAAGTTTTGTTTGATTTTTCTGATTACATGCCTTATTGGTATAACTTTTACTTCAGCTCAGTTATCCCCTAGATTCTATGATAAAACGTGTCGTCGAGCCCTTCCCACCATAAGGAGAGCAGTGAGAGAAGTTGTTTCCAAAGAGCCCCGCATGGGGGCATCCTTGCTTCGACTCCATTTCCATGATTGCTTTGTTCAAGGATGTGATGCATCAGTATTGTTAGACGACACAGATAGCTTCACTGGTGAGAAGAATTCATTTCCTAATGCTAACTCCCTTAGAGGTTTTGAGGTGATAGATGATATCAAGAAACAATTGGAGAGCATGTGCCCTGGTGTTGTCTCTTGTGCTGACATCCTAACCATTGCTGCTAGAGACTCTGTTGTTGCTCTTGGTGGAGAAAGATGGAACCTACTATTAGGAAGAAGAGATTCTACCACAGCAAGTTTAGATGCATCTAATTCAGACTTACCTGCTCCCTTTTTGGATCTTAGTGGACTCATCTCTGCTTTTGACAAGAAAGGCTTCACAACCGCAGAAATGGTTACTTTATCAGGAGCTCACACGATAGGACTAGTGAGGTGCCTTTTTACCAGAGCAAGGATTTATAACGAGACGAACATAGATCCCTTATTTGCAACATCAATGCAAGAAAACTGTGCTTTTGACAGTGGTGATACTGATAACAATGTCTCTCCTTTTGATTCAACCACTCCATTTGTTTTTGACAATGCTTTCTACAAGAACCTGCTGATCCAAAAGGGTCTCGTGCACTCGGACCAACAACTCTTCGCGAATGGAACAGGATCCACAGACAAACAAGTAATGAGATATAGCAAAAACTTTGGAGGTTTCAAAAAAGACTTTGCAGCTGCAATGTTCAAGATGACCTTGCTTAGCCCACTAACTGGCACTGATGGTTCTCTGTCTTGTTTGATTTTTCTGATTACAATTTGTCTTGTGGGGAAAACTTCAGCTGTGTTATCCACTATATTCTATAATGAAACGTGTCCTAAAGCCCTTCGCACAATTAGGAGTGCAGTGGAAGCTGCTGTTTCCAAAGAGCCTCGCATGGGGGCATCCTTGCTTCGACTCCATTTCCATGACTGCTTTGGATGTGATGCATCAGTATTGTTAGACGACACAGACAGCTTCACTGGTGAGAAGAATTCATTTCCGAATGCTAACTCCCTGAGAGGTTTTGAGGTCATTGATGATATCAAAAAACAATTGGAGAGCATGTGCCCTGGTGTTGTCTCTTGTGCTGACATCCTAACCGTTGCTGCTAGAGACTCTGTTTTTGCTCTTGGTGGACAAAGATGGGATCTGCAACTAGGAAGAAGAGATTCAACCACAGCAAGTTTAGATGCATCTAATTCAGACTTACCTGCTCCCTTTTTGGATCTTAGTGGACTCATCTCTGCTTATGGCAAGAAAGGCTTCAATGCCACAGAAATGGTCACTTTATCAGGAGCTCACACAATAGGTCTATCGAGGTGCATTTTTTACAGAGACAGGATTTATAACGAGACGAACATAGATCCCTCATTTGCAGCATCAATGCAAGTAAATTGTTCTTTTGATGGTGGTGATACTGATAACAATGCCTCTCCTTTTGATTCCACCACTCAATTCAAATTTGACAATGCTTTCTATCAGAACCTGTTGAACCAAAAGGGTCTGGTGCATTCGGACCAACAACTCTATGTGAATGGATCAGGAACCACAGACTCTCAAGTAACTAGCTATAGCAAAAATGCGGGACGTTTCTTAGAAGACTTTGCAAATGCAATGGTCAAGATGAGCTTGCTTAGCCCATTAACTGGCTCTGATGGTCAGATCAGGAAAAACTGCAGGGTTGTTAATTCATAG 1974 0.4179 MSIITSKPSFPFSATCRIKPFAMSSFESFPGFKFKFCLIFLITCLIGITFTSAQLSPRFYDKTCRRALPTIRRAVREVVSKEPRMGASLLRLHFHDCFVQGCDASVLLDDTDSFTGEKNSFPNANSLRGFEVIDDIKKQLESMCPGVVSCADILTIAARDSVVALGGERWNLLLGRRDSTTASLDASNSDLPAPFLDLSGLISAFDKKGFTTAEMVTLSGAHTIGLVRCLFTRARIYNETNIDPLFATSMQENCAFDSGDTDNNVSPFDSTTPFVFDNAFYKNLLIQKGLVHSDQQLFANGTGSTDKQVMRYSKNFGGFKKDFAAAMFKMTLLSPLTGTDGSLSCLIFLITICLVGKTSAVLSTIFYNETCPKALRTIRSAVEAAVSKEPRMGASLLRLHFHDCFGCDASVLLDDTDSFTGEKNSFPNANSLRGFEVIDDIKKQLESMCPGVVSCADILTVAARDSVFALGGQRWDLQLGRRDSTTASLDASNSDLPAPFLDLSGLISAYGKKGFNATEMVTLSGAHTIGLSRCIFYRDRIYNETNIDPSFAASMQVNCSFDGGDTDNNASPFDSTTQFKFDNAFYQNLLNQKGLVHSDQQLYVNGSGTTDSQVTSYSKNAGRFLEDFANAMVKMSLLSPLTGSDGQIRKNCRVVNS* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0063 657 PANTHER PEROXIDASE 72-RELATED 348 656 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g0063 657 ProSitePatterns Peroxidases proximal heme-ligand signature. 214 224 IPR019793 -
Lja5g0063 657 Gene3D - 59 342 - -
Lja5g0063 657 PRINTS Haem peroxidase superfamily signature 166 178 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g0063 657 PRINTS Haem peroxidase superfamily signature 269 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g0063 657 PRINTS Haem peroxidase superfamily signature 148 165 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g0063 657 PRINTS Haem peroxidase superfamily signature 86 100 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g0063 657 PRINTS Haem peroxidase superfamily signature 214 229 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g0063 657 Gene3D - 366 653 - -
Lja5g0063 657 ProSitePatterns Peroxidases active site signature. 393 404 IPR019794 GO:0004601
Lja5g0063 657 CDD secretory_peroxidase 54 341 IPR033905 GO:0004601|GO:0042744
Lja5g0063 657 ProSiteProfiles Plant heme peroxidase family profile. 54 343 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g0063 657 ProSitePatterns Peroxidases active site signature. 86 97 IPR019794 GO:0004601
Lja5g0063 657 SUPERFAMILY Heme-dependent peroxidases 54 342 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja5g0063 657 ProSiteProfiles Plant heme peroxidase family profile. 361 656 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g0063 657 PRINTS Plant peroxidase signature 166 181 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g0063 657 PRINTS Plant peroxidase signature 325 338 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g0063 657 PRINTS Plant peroxidase signature 283 300 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g0063 657 PRINTS Plant peroxidase signature 213 225 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g0063 657 PRINTS Plant peroxidase signature 128 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g0063 657 PRINTS Plant peroxidase signature 147 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g0063 657 PRINTS Plant peroxidase signature 88 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g0063 657 PRINTS Plant peroxidase signature 64 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g0063 657 PRINTS Plant peroxidase signature 267 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g0063 657 Gene3D Peroxidase, domain 2 497 635 - -
Lja5g0063 657 Gene3D Peroxidase, domain 2 192 330 - -
Lja5g0063 657 PANTHER PEROXIDASE 22 343 - -
Lja5g0063 657 PANTHER PEROXIDASE 348 656 - -
Lja5g0063 657 PANTHER PEROXIDASE 72-RELATED 22 343 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja5g0063 657 CDD secretory_peroxidase 362 655 IPR033905 GO:0004601|GO:0042744
Lja5g0063 657 Pfam Peroxidase 379 619 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g0063 657 Pfam Peroxidase 72 314 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja5g0063 657 ProSitePatterns Peroxidases proximal heme-ligand signature. 519 529 IPR019793 -
Lja5g0063 657 SUPERFAMILY Heme-dependent peroxidases 362 656 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0063 Lja-Chr5 637651 648747 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0063 360 656 Peroxidase AT5G05340 57.191 8.06e-114 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0063 K00430 - bdi:100830117 609.757