Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0043 ATGAGCTCAGCTGCATCGATGAATCATGGTGTGTTTTCACTCTCAGGACGAAGTTCAATGCCAGGTTCTCTTCCTTTCGGTGAAAACAATGCCATCAAATTCTCAACCACCCATTTCCATTTGGAATATTCACTTCATAAGCTTCAGCTTCGGTCCTTCAATGCTAAAAGAAAAATGTGCAGGGTTCCCAAACTAATAGCTATGGCAACTGGGGTGGAAGAAGTTCTGCCTCCACCACTTACTTCTACTTCAGTTCCACCTTCATTGTTTGATGGAACAGCGAGGTTGTATATCTCTTACCAATGCCCCTATGCTCAGCGTGTATGGATCACCCGTAACTGTAAGGGATTGCAGAACCAGATAGAATTGGTTCCTATTGATCTACAAGATAGGCCTTCCTGGTATAAGGAGAAAGTCTACCCACCTAACAAGGTTCCATCCCTTGAACACAATAATGAAGTCAGAGGAGAGAGTCTCGATCTCATTAAATATATTGATACTCACTTTGAAGGGCCCTCCCTTTTCCCAAGTGGACCTGATGATGAGGAGTTTGCTGAAGAATTGATATCTTATGCTGGTACATTTTACAAGACAGTTATATCTTCATTTAAAGAAGATGTGACTGAAGCTGGGACCGCATTTGATTACCTCGAAACTGTTCTCTCCAAATATGATCAGGGGCCTTTCTTCCTTGGCCAATTCAGTCTTGTGGATATAGCATATGCTCCTTTCATTGAAAGATTTCAATTATTTTTAATGGAAGTGAAAAATTATGATATTAAAAGCGGAAGGCCTAAACTGGCAGCGTGGATTGATGGAATGAATAACATTGATGGCTACAAAGTAACTCGTTCTGATCCGAAGGAGCTGGTTGAAAGCTACAAGAAGCGCTTCCTGGGCAATCCATGA 909 0.4169 MSSAASMNHGVFSLSGRSSMPGSLPFGENNAIKFSTTHFHLEYSLHKLQLRSFNAKRKMCRVPKLIAMATGVEEVLPPPLTSTSVPPSLFDGTARLYISYQCPYAQRVWITRNCKGLQNQIELVPIDLQDRPSWYKEKVYPPNKVPSLEHNNEVRGESLDLIKYIDTHFEGPSLFPSGPDDEEFAEELISYAGTFYKTVISSFKEDVTEAGTAFDYLETVLSKYDQGPFFLGQFSLVDIAYAPFIERFQLFLMEVKNYDIKSGRPKLAAWIDGMNNIDGYKVTRSDPKELVESYKKRFLGNP* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0043 302 Gene3D - 171 301 - -
Lja5g0043 302 SFLD Glutathione Transferase (cytosolic) 96 274 IPR040079 -
Lja5g0043 302 SUPERFAMILY Thioredoxin-like 84 174 IPR036249 -
Lja5g0043 302 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 92 173 IPR004045 -
Lja5g0043 302 PANTHER GLUTATHIONE S-TRANSFERASE L2, CHLOROPLASTIC 32 299 - -
Lja5g0043 302 Pfam Glutathione S-transferase, C-terminal domain 205 272 - -
Lja5g0043 302 SUPERFAMILY GST C-terminal domain-like 169 298 IPR036282 -
Lja5g0043 302 PANTHER GLUTATHIONE S-TRANSFERASE L1 32 299 IPR044629 GO:0004364
Lja5g0043 302 Gene3D Glutaredoxin 67 170 - -
Lja5g0043 302 CDD GST_C_Lambda 178 295 - -
Lja5g0043 302 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 151 298 IPR010987 -
Lja5g0043 302 Pfam Glutathione S-transferase, N-terminal domain 96 172 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0043 Lja-Chr5 486878 491652 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0043 57 297 Glutathione S-transferase Gene Family AT3G55040 61.157 7.50e-106 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0043 K00799 - csv:101220995 356.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja5g0043 5 486878 491652 Lja5g0043 5 486878 491652 ECH