Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0033 ATGGAACAACGCAGAGACTTTCACCGTCGTACTGCTCATCTGGCACATGCTTCTCCTCCTCCTGGTTACTTTGTCCGCCTGGGAAATACAAGCAAAGACGATTTATATTTGAGGAAGAGAACAAGGATGCGTCGCTGGCTTTGTTGCACTTGTCAAGTGGAAGAGCCTTACCCATCAAATGAAAATGACCACCTCAAAAGCCCCCGGAATTATGGAGATGGCAACTCAAAAGGCTCAAAGGCTTCAGCTCCTGTCAAGCATGAAACACAAAAAGCACCACCACCTATCGAAGTTCCTGCATTATCCTTAGATGAGCTCAAGGAGAAGACTGACAACTTTGGATCAAAGGCATTGATTGGTGAAGGATCATATGGAAGGGTGTATTACGCAACCTTAAATGATGGAAACGCTGTGGCTGTGAAGAAGCTTGATGTTTCTTCTGAACCCGAAACAAATAATGAATTTTTGACTCAGGTTTCCATGGTCTCAAGATTGAAGAATGACAATTTTGTTGAGTTGCACGGTTATTGTGTTGAAGGAAATCTTCGAGTTCTTGCATATGAGTTTGCTACTATGGGCTCTCTTCATGACATATTGCATGGTAGAAAGGGAGTTCAAGGGGCACAGCCAGGTCCAACTCTTGATTGGATACAGCGTGTTAGAATTGCAGTTGACGCTGCAAGGGGACTAGAATATTTGCACGAGAAAGTTCAACCGGCTATTATTCACAGAGATATCAGATCAAGTAACGTGCTTATCTTTGAAGATTACAAGGCTAAGATAGCTGATTTCAACCTTTCTAATCAGGCCCCTGACATGGCTGCACGCCTTCATTCTACTCGAGTGTTGGGAACTTTTGGGTATCATGCTCCAGAATATGCCATGACTGGCCAGTTGACACAAAAAAGTGATGTCTACAGTTTTGGTGTTGTTCTTCTTGAGCTTCTTACAGGAAGAAAACCTGTTGATCACACCATGCCCCGAGGACAGCAAAGTCTTGTCACATGGGCTACCCCACGATTGAGTGAGGATAAAGTGAAACAATGCGTGGACCCAAAACTGAAGGGTGAATATCCCCCAAAAGGAGTTGCTAAGCTGGCAGCTGTTGCAGCACTGTGTGTGCAGTATGAAGCTGAGTTTAGGCCAAATATGAGCATTGTTGTTAAAGCACTGCAACCACTTCTGAAGACCCCCGCTGCTGCTCCTGCACCAGAAAATTGA 1221 0.4464 MEQRRDFHRRTAHLAHASPPPGYFVRLGNTSKDDLYLRKRTRMRRWLCCTCQVEEPYPSNENDHLKSPRNYGDGNSKGSKASAPVKHETQKAPPPIEVPALSLDELKEKTDNFGSKALIGEGSYGRVYYATLNDGNAVAVKKLDVSSEPETNNEFLTQVSMVSRLKNDNFVELHGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWIQRVRIAVDAARGLEYLHEKVQPAIIHRDIRSSNVLIFEDYKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKTPAAAPAPEN* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0033 406 Pfam Protein tyrosine and serine/threonine kinase 118 391 IPR001245 GO:0004672|GO:0006468
Lja5g0033 406 ProSitePatterns Tyrosine protein kinases specific active-site signature. 241 253 IPR008266 GO:0004672|GO:0006468
Lja5g0033 406 MobiDBLite consensus disorder prediction 58 95 - -
Lja5g0033 406 MobiDBLite consensus disorder prediction 1 25 - -
Lja5g0033 406 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524
Lja5g0033 406 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 28 404 - -
Lja5g0033 406 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 3 28 404 - -
Lja5g0033 406 SMART tyrkin_6 113 391 IPR020635 GO:0004713|GO:0006468
Lja5g0033 406 ProSiteProfiles Protein kinase domain profile. 113 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lja5g0033 406 SUPERFAMILY Protein kinase-like (PK-like) 93 391 IPR011009 -
Lja5g0033 406 Gene3D Phosphorylase Kinase; domain 1 76 189 - -
Lja5g0033 406 Gene3D Transferase(Phosphotransferase) domain 1 191 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0033 Lja-Chr5 349877 354618 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0033 47 392 Receptor kinase-like Gene Family AT4G02010 46.418 9.97e-94 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Lja5g0033 PK_Tyr_Ser-Thr 6.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0033 K13436 - mnt:21407434 690.649