Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0019 ATGTCAAAAACAGAGAAAATGGAATACTGGTTAGTAGTGGGTTTTGTGTTAGCAATGTTAGTGTGGTTCATGTTGGTGATCATCACGGAACATAATAGCCATGGTAGTAGTAAAAAACTACTTCCACCGGGACCAACACCTTGGCCATTGGTTGGCAACATATTCCAACTAGGCTGGTCACCACACGAGTCCTTCACAAAACTCGCTCACAAACATGGTCCCATCATCACCCTCTGGCTCGGTTCTATGTGCACCGTGGTGGTCTCCTCCAACGAAGTGGCTCGTGAAATGTTCAAAAACAACGACGTGGTTCTTGCCGGAAGGAAAATCTACGAGGCCATGAAAGGAAACCACGGTCATGAAGGCTCCCTCATAACCTCTCAATACGGTGCTCACTGGCGCATGCTGAAGCGCTTGTGCACCACTGAGTTTTTCGTCACAAGTCGCTTGGAATTCACGCAAGGTGTTCGCGTGAAGTGCGTTAACCAAATGGTGCGCTTTATAGAAGAAGAAGCTGCTTCTGGTGAAAATGGAACTCGTGGCGTTGAGCTTGGGAGGTTCTTTTTCTTGATGGCTTTTAACCTTATTGGGAACCTTGTTTTTTCAGAGGATTTGTTGTTGGACAAATGCAAAATGGAGAGAGGGAAAGGGTTTTATGAGCATGCGGTTAAGGTTATGGAGTATGCTGGAAAGCCTAATGTAGCGGATTTCTTCCCGGTATTCAAGTGGCTTGACCCTCAGGGTATTAGGAGGAAGACACAGTACCACGTTGAAAGGGCCTTTGAGATTGCAGGCTGGTTCATTCAACAGAGGATGATCCAAATGCAAAATAATAGTGGGAAGGACAAGAGGGACAAAGACTTCTTGGATGTTCTGTTGGAATTTGATGGGGATGGTGTCACTGGGCCCTATTCTTTTTCTTCAAGGACTATTAATGTAGTTATCTTTGAAATGTTCACTGCCGGCACAGACACGACAACAAGCACAATGGAATGGGCTATGGCAGAGCTTCTGAATAATCCAAGAACGCTAAAGAAGGTGCAGATGGAGCTAAGGACCAAAGTAGGCCCGCCTGATAAGAGGAATATTGAAGAAAAGGACATTGAGAATCTTCCTTACCTGAAAGCAGTGATCAAGGAGACACTGAGACTCCATCCACCTCTTCCTTTTCTGGTTCCTCACATGGCTATGGACTCTTGCAACTTGCAAGGCTGCCAAATTCCCAAAGAGTCACAAGTTTTAGTGAATGTTTGGGCAATTGGGAGGGACCCTAAAGTGTGGGATGCTCCCTTGTTGTTCTGGCCAGAAAGGTTTTTGGAGCCAAACATGCAGGTGGATTACAAGGGACACCATTTTGAGTTTTTGCCTTTTGGGTCAGGTCGGCGAATGTGCCCGGCTATGCCACTTGCATCTCGCGTGCTTCCCTTGGCGCTAGGGTCTCTCTTGCACTTGTTTGATTGGGTTTTGCCGGATGGCCTTAAACCAGAGGAGATGGACATGACAGAAGGAATGGGAATAACGCTTAGAAAAGCTGTTCCTTTGAAAGCCATACCACTGCCTTACAAACCAAGGAACTAA 1578 0.4632 MSKTEKMEYWLVVGFVLAMLVWFMLVIITEHNSHGSSKKLLPPGPTPWPLVGNIFQLGWSPHESFTKLAHKHGPIITLWLGSMCTVVVSSNEVAREMFKNNDVVLAGRKIYEAMKGNHGHEGSLITSQYGAHWRMLKRLCTTEFFVTSRLEFTQGVRVKCVNQMVRFIEEEAASGENGTRGVELGRFFFLMAFNLIGNLVFSEDLLLDKCKMERGKGFYEHAVKVMEYAGKPNVADFFPVFKWLDPQGIRRKTQYHVERAFEIAGWFIQQRMIQMQNNSGKDKRDKDFLDVLLEFDGDGVTGPYSFSSRTINVVIFEMFTAGTDTTTSTMEWAMAELLNNPRTLKKVQMELRTKVGPPDKRNIEEKDIENLPYLKAVIKETLRLHPPLPFLVPHMAMDSCNLQGCQIPKESQVLVNVWAIGRDPKVWDAPLLFWPERFLEPNMQVDYKGHHFEFLPFGSGRRMCPAMPLASRVLPLALGSLLHLFDWVLPDGLKPEEMDMTEGMGITLRKAVPLKAIPLPYKPRN* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0019 525 SUPERFAMILY Cytochrome P450 42 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0019 525 Gene3D Cytochrome P450 26 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0019 525 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0019 525 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0019 525 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0019 525 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0019 525 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0019 525 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0019 525 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0019 525 PANTHER CYTOCHROME P450 76A1-LIKE 7 521 - -
Lja5g0019 525 PANTHER CYTOCHROME P450 FAMILY 1 7 521 - -
Lja5g0019 525 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0019 525 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0019 525 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0019 525 Pfam Cytochrome P450 42 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja5g0019 525 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0019 Lja-Chr5 191617 193893 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0019 17 522 Cytochrome P450 AT3G52970 61.260 0.0 613
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0019 - - lja:Lj5g3v2300360.1 1087.02