Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja5g0010 ATGTATCCTCATCATTCCTCTTCTTCTTCCTCCTCCTCCTCCTCCCAGACAGGCACTGGCTTGACCCGCTACGGCTCCGCACCAAGCTCTCTCCTCAACAGCACCGTCGAGGCTGTCTTAGCAGCAGGTGGATCGCGTCTTCTTCCCCCCGGGGGTGGGGGTGGGGCCCAAGCTCACTACTACTCTTCCTCCGGGGACTCTTCTTCCGATACAACCTGCAAAGAGCATAACATCAGATCTTCTCCTACTTCATACCACCATGACGCCTTTCTTAATTCTGCTGGATCCGCCTCCTTGCTCCGTCAGAAGAGCTCTCCCGCCGGCTTCCTCTCTCACAATCACAATCACAATCACAATCACAATTCCAATCTCAATGCAGGGTTCACCATCACCAGGGGAAGCTCACATTCTCATTCTCATTCTCAATCTCAAGGAGGAGGAGGAGGATCGAGGTTGAAATCTGAATTGAGCTTCACGGCACAAGGCCAAGAATGTCTCTCTCGGATATCCGAAAATCTTGTTGTTGATGCCTCCACCTCTTATGGGACCCAACACCAGCCCTGGGGGGGTCGGGGTCAAGATGGGGATAATTCCATCGTCTTTTCTGCTCCTCCTAAGCGTTCCAAAACTAACGATCCTGATTTTCTCACCGCCCTCGATTCTCAGTTTAGTATGCCTCAGACAACTCTGGAAATGGCAGCCGTCGAGAACATGTTGCACATTCCTCAAGATTCCGTCCCTTGTAAAATCCGTGCTAAACGAGGCTGCGCTACTCATCCCCGCAGTATTGCTGAACGGGTCACTTTCTTAATCTCACTATATAGCCTTTATATTATATTAACTGTCATTTCTCATACACCAGAACCAGACTACCCTCACTCTCAACTCAAACATAATGAAATGGCTGGCACCAACATCCATCAAATAGGAAATTGTATTACACCTCCACTACACACGATGCTTCTTAGAAAAAGATCCTTGGAAGATCTGTTGCTATTTTCCTCGTCAAATGAGGACATACATTGA 1026 0.4873 MYPHHSSSSSSSSSSQTGTGLTRYGSAPSSLLNSTVEAVLAAGGSRLLPPGGGGGAQAHYYSSSGDSSSDTTCKEHNIRSSPTSYHHDAFLNSAGSASLLRQKSSPAGFLSHNHNHNHNHNSNLNAGFTITRGSSHSHSHSQSQGGGGGSRLKSELSFTAQGQECLSRISENLVVDASTSYGTQHQPWGGRGQDGDNSIVFSAPPKRSKTNDPDFLTALDSQFSMPQTTLEMAAVENMLHIPQDSVPCKIRAKRGCATHPRSIAERVTFLISLYSLYIILTVISHTPEPDYPHSQLKHNEMAGTNIHQIGNCITPPLHTMLLRKRSLEDLLLFSSSNEDIH* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja5g0010 341 MobiDBLite consensus disorder prediction 60 86 - -
Lja5g0010 341 PANTHER TRANSCRIPTION FACTOR BHLH129 20 267 - -
Lja5g0010 341 MobiDBLite consensus disorder prediction 1 28 - -
Lja5g0010 341 MobiDBLite consensus disorder prediction 50 86 - -
Lja5g0010 341 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 20 267 - -
Lja5g0010 341 MobiDBLite consensus disorder prediction 127 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja5g0010 Lja-Chr5 118386 121585 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja5g0010 18 266 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05805 36.455 9.21e-32 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja5g0010 - - var:108325944 197.208