Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4407 ATGGAGAAGAAGGAAGAGAAAGGAACAGATCGAGTTGGGAAAATGAATGATTCTTCAGGAGATAACTGGCTTAATCCGTTTGATGACGAGCTTTATATCATCGATGAGGATGATAGTCTGAATTCTAGCCCTGCCAACGGTTTGAAGCAGGGTGTGAATGAAGGGGATAATGATGGGGAAAATTTTGTGGATGTCGATGAGATGTTTGAAACTGGAAATGACAGTCAAAAAAACTCTGATGTAGAAGTTAAAGTCATGAAAAGGATTACTGAATTGTCTGCAGACGACATTAGAGGGATGGATTTCTCTTCTGAGGAGGAAGCATGTGAATTCTATTCTAAATATGCTCGTATCCGTGGATTCTCTCCAAGAAAAGATGATGTATACAAGGATGATGATGGCAAGATTATCTCACGACAGGTGGTGTGCAATAGGGCTGGACAAAGGCATCAGAAGCATATGCATAATAGTGGCAGAAGAAAACAACCTAAGCCTATTACTAGAGTGGGTTGCCTTGCTAGAATTCGATTTCGTTGTTTTTCTAGCAGTAAAAGGTGGAAAGTGGTTTTTTTTTGCGATGAACACAATCACCCATTAACACCATATAAGCATGTTCATTTGATTCCAAAACTCCGGCAATTGAGTGAAGGGGACAAAGCTCAAGCAGAAAAGGTATGA 678 0.4012 MEKKEEKGTDRVGKMNDSSGDNWLNPFDDELYIIDEDDSLNSSPANGLKQGVNEGDNDGENFVDVDEMFETGNDSQKNSDVEVKVMKRITELSADDIRGMDFSSEEEACEFYSKYARIRGFSPRKDDVYKDDDGKIISRQVVCNRAGQRHQKHMHNSGRRKQPKPITRVGCLARIRFRCFSSSKRWKVVFFCDEHNHPLTPYKHVHLIPKLRQLSEGDKAQAEKV* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4407 225 Pfam FAR1 DNA-binding domain 110 200 IPR004330 -
Lja4g4407 225 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 51 213 - -
Lja4g4407 225 MobiDBLite consensus disorder prediction 1 58 - -
Lja4g4407 225 ProSitePatterns EF-hand calcium-binding domain. 56 68 IPR018247 -
Lja4g4407 225 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 51 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4407 Lja-Chr4 77802455 77804109 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lja4g4407 FAR1 5.5e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4407 - - adu:107459133 139.428