Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4400 ATGCCTCCTGAAGCAATTGACCTTGCATCAAGGCTTCTACAATATTCACCTAGTCTTCGCTGCACTGCGCTGGAAGCATTGACACATCCTTTCTTTGATGAGCTTCGTGAGCCAAATGCCCGACTGCCAAATGGCCGCCCATTGCCCCCACTTTTTGACTTTAAACAGGAATTAGCTGGAGCATCACCTGAGCTGGTAAATAGGCTCATCCCCGAGCACATTAGGCGGCAGGCTGGCATCGGCTTCTCTCATCCGGCCGGTACATAG 267 0.5169 MPPEAIDLASRLLQYSPSLRCTALEALTHPFFDELREPNARLPNGRPLPPLFDFKQELAGASPELVNRLIPEHIRRQAGIGFSHPAGT* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4400 88 PANTHER SHAGGY-RELATED PROTEIN KINASE IOTA-RELATED 1 80 - -
Lja4g4400 88 SUPERFAMILY Protein kinase-like (PK-like) 2 56 IPR011009 -
Lja4g4400 88 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 1 80 - -
Lja4g4400 88 Gene3D Transferase(Phosphotransferase) domain 1 1 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4400 Lja-Chr4 77627203 77627469 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4400 1 35 Core Cell Cycle Gene Families AT2G38620 48.571 2.61e-06 41.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4400 K14502 - tcc:18612073 170.244