Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4375 ATGGCAACAAGTCAAAGTGTTGTTGGCGAAGAACAACAAGATAACAAGCTCAAGCTTTATTCATATTGGAGGAGCTCTTGTTCCTTCCGAGTCCGAATTGCTCTCAACCTCAAAGGGCTCAAATATGAGTACAAACCAGTCAATCTGTTGAAGGGAGAACAATCTAACCCTGAGTTTCTCAAGCTCAACCCTGTTGGCTGTGTTCCTGTTCTGGTCGATGGCCCTGCTGTCATCTTTGATTCGTTCGCCATTATTATGTATTTGGAGGACAAGTATCCGAACCATCCTTTGCTTCCTCGTGATATTAATCAAAGAGCAATCAATTTCCAGGCTACCAGTATTGTTTTCTCAGCAATACAACCTCTTCATAACTTGGGTATTCTGAATTACGTTGGGGAAAAAGGTGGCCCTGATGCAAAAATTCCTTGGGTCCAGAGTGTAATTAGAAAAGGCTTCACAGCACTTGAAAAGCTATTGAAAGAACATGCTGGAAGATATGCAACTGGAGATGAAGTTTTCCTGGCAGATATATTTTTAGCGCCTCAGTTGCATGCTGCATATAACAGGTTCAACATTCAAATGCAGGATGAGTTCCCTATTCTAGCAAGGTTACATGAGACATATTATGAGATCCCAGCATTTCGGGAGGCTTTGCCAGAGAACCAGCCAGATGCAGCACGCTAG 684 0.4284 MATSQSVVGEEQQDNKLKLYSYWRSSCSFRVRIALNLKGLKYEYKPVNLLKGEQSNPEFLKLNPVGCVPVLVDGPAVIFDSFAIIMYLEDKYPNHPLLPRDINQRAINFQATSIVFSAIQPLHNLGILNYVGEKGGPDAKIPWVQSVIRKGFTALEKLLKEHAGRYATGDEVFLADIFLAPQLHAAYNRFNIQMQDEFPILARLHETYYEIPAFREALPENQPDAAR* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4375 227 TIGRFAM maiA: maleylacetoacetate isomerase 18 225 IPR005955 GO:0003824|GO:0005737|GO:0009072
Lja4g4375 227 Pfam Glutathione S-transferase, N-terminal domain 16 89 IPR004045 -
Lja4g4375 227 Gene3D Glutaredoxin 14 99 - -
Lja4g4375 227 CDD GST_N_Zeta 17 89 IPR034333 -
Lja4g4375 227 SFLD Glutathione Transferase (cytosolic) 17 207 IPR040079 -
Lja4g4375 227 SUPERFAMILY GST C-terminal domain-like 96 224 IPR036282 -
Lja4g4375 227 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 15 96 IPR004045 -
Lja4g4375 227 SFLD Main (cytGST) 17 207 - -
Lja4g4375 227 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 101 227 IPR010987 -
Lja4g4375 227 SUPERFAMILY Thioredoxin-like 13 100 IPR036249 -
Lja4g4375 227 PANTHER MALEYLACETOACETATE ISOMERASE 10 226 - -
Lja4g4375 227 PANTHER GLUTATHIONE S-TRANSFERASE 2-LIKE ISOFORM X1 10 226 - -
Lja4g4375 227 Pfam Glutathione S-transferase, C-terminal domain 140 215 IPR004046 -
Lja4g4375 227 Gene3D - 100 227 - -
Lja4g4375 227 CDD GST_C_Zeta 104 222 IPR034330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4375 Lja-Chr4 77304155 77308177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4375 16 225 Glutathione S-transferase Gene Family AT2G02380 64.762 3.42e-99 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4375 K01800 - gmx:547590 354.755