Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4367 ATGTGGTCTCAAAAGCATGCAATTCTACTCTTGTTTTCAGTCACACTTTTTTCTCTGTTCCATTTCCATGTTTCTGCGGTGAAAAAGTCTTACATAGTGTACTTGGGATCACACGACCATGGTGAAGGAGTTACCAATGCTGATTTTGAACGAGTGTCAGACACTCACCATGAATTCCTTCAATCCTATTTGGGAAGTTTGGAGAAAGCGAAAGATTCAATGATATATTCATACACAAGGAACATCAATGGCTTCGCTGCAAACCTCGAAGAACATGAGGCTGCTGACATTGCAGATCATCCAAACGTTGTGTCAGTGTTCTTAAACAAAGGAAGAAAACTACACACTACACATTCATGGGAATTCATGTCGCTGGAACAGAATGGTGTTGCTCCCTCTAGTTCGCTCTTTAGAAAAGCCAGATTTGGTGAAGATACTATTATTGGGAATCTTGACACTGGTGTATGGCCAGAATCTCCTAGCTTTAGAGATGAGGGGATAGGACCCATTCCTTCAAGGTGGAAAGGAACTTGCCAGAATGAGATCACTGGCTTTCCTTGCAACAGGAAGCTCATAGGAGCAAGGTACTTCAACAAAGGTTATGCAGCCAATGCAGGGCCAGCAGCATTGACAAACATTACACTTAACACTGCAAGAGACTATGAAGGTCATGGATCTCACACGCTATCGACTTTGGGAGGAAACTTTGTTCGTGATGCAAGTGTCTTTGGCTTGGGTAATGGAACTGCCAAAGGTGGTTCTCCTAAAGCCAGGGTTGCCGCTTACAAGGTGTGCTGGCCACCATTAGTTGATGGCGGCGGTGGGTGTTTTGATGCAGATATCTTGGCAGCATTTGACATGGCTATCCATGATGGTGTTGATGTTCTGTCCCTCTCTCTTGGAGACACTCCTTCTGATTACTTTGATGATGGTGTTTCAATTGGAGCATTTCATGCTGTGAACAAGGGCATCACTGTGTTGTGCTCAGCTGGGAACTCTGGACCAATACCAGGAACTGTTACAAATAATGCACCTTGGATATTAACAGTCGCTGCAAGCACCTTGGATAGAGAGATTGATACTGTTGTTGAACTCCAGAATGGACACCAATTCAGGGGAGCAAGCCTTTCTGAAGCTTTGCCAGAAGACAAGCTTTACCCTCTCATTAGTGCTGCACAAGCAAAAGTAGCAAACGCATCAGTTGAAAATGCTACTCTCTGTATGGTTGGATCAATTGACCCACGGAAGGTGAAGGGCCAAATATTGGTTTGTCTGAGAGGTATATCTCCAAGAGTGGAAAAGAGCCTTGTTGCTTTTGAGGCTGGTGCAGCAGGAATGATTCTTTGCAATGATGAGCTTAGTGGTAATGAGCTCATTGCTGATCCTCATTTCCTGCCTTCATCCCAAATCAGTTATGAAGATGGTCTTGTTGTCTTTGCCTACATCAATTCAACCAAGAATCCACTAGGATATATTCATCCACCCACAACCAAGTTGCAAATAAAGCCTGCTCCATCCATGGCAAGCTTCTCTTCTAGAGGCCCCAACACAATCACACCAGAGATCCTCAAGCCTGATATCACTGCTCCTGGTGTGAACATCATTGCTGCATACACAGGAGCGGCTAGCCCGACAGAGTTGGATTATGATACGCGTAGGGTTCCTTTTATCACCATGTCCGGAACATCCATGTCCTGCCCTCATGTGGCTGGAGTTGTTGGCCTTCTCAAGACCCTCCACCCTCACTGGAGTCCATCAGCTATTAAGTCTGCAATAATGACAACTGCTAGGATAAGGGACAACACTGGAAAGCCAATTCTTGATGGCAATAATGCAAAGGCAACACCATTTGCATATGGCTCTGGTCACATTAGACCAAACCGTGCCATGGATCCTGGCTTGGTCTATGACTTAACCATCAATGATTACCTGAACTTCCTTTGTTATCGTGGTTATAACCAGACACAGATAAAGATGTTCTATGGTACTCCTCATCACTGTCCTGATAGAATCAACATCCTGGATTTCAACTACCCTACCATAACAATACCAAAAATTTATAGCCCAATTACATTGACCAGAAAGCTGAAAAATGTTGGTGCACCAGGGAATTACACTGCTAGCCTCCGTGTACCTGCAGGCCTAGCAATATCTGTGGAGCCTAATGTCTTGAAATTTGACAAGATTGATGAAGAGAAGAGCTTCAAGTTGAGTGTTGAAGTTACAAGACCAGGTGCGGCTACAGTGTTTGGAGGGTTAACTTGGTCAGATGGTAAACACTATGTTAGGAGTCCAATTGTAGTTGGAGGTGTTAGAGGTTAG 2322 0.4436 MWSQKHAILLLFSVTLFSLFHFHVSAVKKSYIVYLGSHDHGEGVTNADFERVSDTHHEFLQSYLGSLEKAKDSMIYSYTRNINGFAANLEEHEAADIADHPNVVSVFLNKGRKLHTTHSWEFMSLEQNGVAPSSSLFRKARFGEDTIIGNLDTGVWPESPSFRDEGIGPIPSRWKGTCQNEITGFPCNRKLIGARYFNKGYAANAGPAALTNITLNTARDYEGHGSHTLSTLGGNFVRDASVFGLGNGTAKGGSPKARVAAYKVCWPPLVDGGGGCFDADILAAFDMAIHDGVDVLSLSLGDTPSDYFDDGVSIGAFHAVNKGITVLCSAGNSGPIPGTVTNNAPWILTVAASTLDREIDTVVELQNGHQFRGASLSEALPEDKLYPLISAAQAKVANASVENATLCMVGSIDPRKVKGQILVCLRGISPRVEKSLVAFEAGAAGMILCNDELSGNELIADPHFLPSSQISYEDGLVVFAYINSTKNPLGYIHPPTTKLQIKPAPSMASFSSRGPNTITPEILKPDITAPGVNIIAAYTGAASPTELDYDTRRVPFITMSGTSMSCPHVAGVVGLLKTLHPHWSPSAIKSAIMTTARIRDNTGKPILDGNNAKATPFAYGSGHIRPNRAMDPGLVYDLTINDYLNFLCYRGYNQTQIKMFYGTPHHCPDRINILDFNYPTITIPKIYSPITLTRKLKNVGAPGNYTASLRVPAGLAISVEPNVLKFDKIDEEKSFKLSVEVTRPGAATVFGGLTWSDGKHYVRSPIVVGGVRG* 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4367 773 ProSitePatterns Serine proteases, subtilase family, serine active site. 561 571 IPR023828 -
Lja4g4367 773 Gene3D Peptidase S8/S53 domain 145 643 IPR036852 GO:0004252|GO:0006508
Lja4g4367 773 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 115 IPR037045 -
Lja4g4367 773 Pfam Subtilase family 143 621 IPR000209 GO:0006508|GO:0008236
Lja4g4367 773 Pfam Peptidase inhibitor I9 30 115 IPR010259 -
Lja4g4367 773 PANTHER BNAC02G33520D PROTEIN 12 769 - -
Lja4g4367 773 PRINTS Subtilisin serine protease family (S8) signature 560 576 IPR015500 -
Lja4g4367 773 PRINTS Subtilisin serine protease family (S8) signature 220 233 IPR015500 -
Lja4g4367 773 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Lja4g4367 773 PANTHER PEPTIDASE S8 12 769 - -
Lja4g4367 773 Gene3D - 356 499 - -
Lja4g4367 773 Gene3D - 647 770 - -
Lja4g4367 773 Pfam Fibronectin type-III domain 675 768 IPR041469 -
Lja4g4367 773 SUPERFAMILY Subtilisin-like 114 634 IPR036852 GO:0004252|GO:0006508
Lja4g4367 773 CDD PA_subtilisin_like 362 492 - -
Lja4g4367 773 ProSiteProfiles Serine proteases, subtilase domain profile. 119 630 - -
Lja4g4367 773 Pfam PA domain 405 475 IPR003137 -
Lja4g4367 773 CDD Peptidases_S8_3 113 596 IPR034197 -
Lja4g4367 773 SUPERFAMILY PA domain 414 485 IPR046450 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4367 Lja-Chr4 77250191 77254947 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4367 18 768 Subtilisin-like Serine Gene Family AT5G59810 62.698 0.0 949
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4367 - - gmx:100808488 1221.07