Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4356 ATGTTAACAAGTGAGTGTTTGCATGATGAAGAAAGCTGTAGCTCTAGCTATAGCAGCAGTGAGATAGGGGACGAAGATTCAGAGTCAGAATCAGATTCCGAGCTGTTTGAGATCAATATTAATATGAAGGAGGGTTTAAGTTTAGATACAATACCAGAAGACTGCGAGAGCGCCAGTGTGTTCTCTCTTGATATTGATAATCACCAAGCTGAGAAAGATGATGTTGTTTATGTGGCTGTGAGTTTTGATGGAAATTCAAGTATGGAAGCGCTTTCATGGGCCTTGAAGCATGCCGTGACACCCTCCTCTACCACTGTGTGTCTCCTACACGTTTTCCCTCAAGTCAAGCTCATTCCAACTCCACTGGGGAAAATTCCTAGGAGTCATGTAAATTTAGAGCATGTTAACATCTGCTTGACCCTAGAGAAAGCCAAGAGGAAATTGCTCCTTCAAAAGTTCATTGACCTATGCGTTGATTCAAAGGTTAAGGTGGAGGTGATGCTGATTGAGGGTGACAATGTTGCTAAAGCCATCGTGGACCTGGTCCGGAATCTCAATATAAGGAAATTAGTGATTGGAACTATCAAGTCTAACTTAAGAAAATCTGCTGGGTCTAGAAGGCAAAATGCAATAGCGGACATGGTGCTGAAAACTATACAAGAAAGCTGTGATATTAAAATCATATGCGAAGGGAGAGAAGTGATCGACCAGATGATTTATTGCAGTAGTACTTCACCACACTCAAAAGACAATGGCAATTTCATAATTCCTCATGGAGAAGAAGATGAATCCCGTGGTGTTGTCCCATTTAAGCGTTTTATGCCCAATCCATTATCGTTATTTTGGTTCAGACATCTATCACTGTAA 867 0.4118 MLTSECLHDEESCSSSYSSSEIGDEDSESESDSELFEININMKEGLSLDTIPEDCESASVFSLDIDNHQAEKDDVVYVAVSFDGNSSMEALSWALKHAVTPSSTTVCLLHVFPQVKLIPTPLGKIPRSHVNLEHVNICLTLEKAKRKLLLQKFIDLCVDSKVKVEVMLIEGDNVAKAIVDLVRNLNIRKLVIGTIKSNLRKSAGSRRQNAIADMVLKTIQESCDIKIICEGREVIDQMIYCSSTSPHSKDNGNFIIPHGEEDESRGVVPFKRFMPNPLSLFWFRHLSL* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4356 288 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 78 198 - -
Lja4g4356 288 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 20 282 - -
Lja4g4356 288 Gene3D HUPs 69 197 IPR014729 -
Lja4g4356 288 MobiDBLite consensus disorder prediction 1 33 - -
Lja4g4356 288 MobiDBLite consensus disorder prediction 8 22 - -
Lja4g4356 288 CDD STK_N 75 231 - -
Lja4g4356 288 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 20 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4356 Lja-Chr4 77109769 77112094 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4356 73 231 U-box Gene Family AT2G45910 29.193 1.27e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4356 - - lja:Lj4g3v0096280.1 531.561