Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4355 ATGGAGGAGTGCCATCACGAAATGTTGAGCTACACTAATAGCCTGAGCTGTGAGATAGAGATAGTGGAAGAGGACAACCATGACGGGGCTAGTCCTATGGCCGCCATTGGCGAAGAAGATGAAGAACAAGATTCTGTTTATGTGGCAGTGGGTAAGGGCGACACAAGCATGGAAGCTCTGTCATGGACACTAAACAACTTGGCTACTCGCTCAACCGTACTTTATCTCATCCATGTTTTCCCTGAGATCAAGCACATTCCAAATCCATTGGGAGTGGGAATGATTCCAAGGAATCAAGTGAGTGCTGAGCAGGTGGAGAGTTACATGGCTCAAGAAAGAGGCAAGAGGAGAGAGCTCCTTCAGAAATTCCTCCAATCATGTTCTAATTCCAAGGTTAAGGGAGACACCATCCTCATTGAGAGTGACATGGTTGGGAAGGCTATCCTTGACCTGATTCCTATTCTTCATGTAAGAAAATTAGTGATCGGAGCCAACAAAGTCCAACTCAGAAAATCAAGATCATCAAGGAAAGGGAATGGTGTAGCTGATCAGATACTGCAGAATGCACCAGAAAGTTGCAAGGTGAGAATTATATGTGAAGGAAAGGAAGTGAATGAGCAGATGATGTTGATGTCACCCTCTCCACAGGTCCTCACAGTCACAGCAGCTTCTACCTCTGCTATTTCCATGACCCCAAAAGAACGTCAGCAAAGTGATTTGGTTTCATGTATTTGTTTCAAGCCTAAGTTTAAATGA 756 0.4458 MEECHHEMLSYTNSLSCEIEIVEEDNHDGASPMAAIGEEDEEQDSVYVAVGKGDTSMEALSWTLNNLATRSTVLYLIHVFPEIKHIPNPLGVGMIPRNQVSAEQVESYMAQERGKRRELLQKFLQSCSNSKVKGDTILIESDMVGKAILDLIPILHVRKLVIGANKVQLRKSRSSRKGNGVADQILQNAPESCKVRIICEGKEVNEQMMLMSPSPQVLTVTAASTSAISMTPKERQQSDLVSCICFKPKFK* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4355 251 CDD STK_N 45 201 - -
Lja4g4355 251 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 17 250 - -
Lja4g4355 251 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 17 250 - -
Lja4g4355 251 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 45 190 - -
Lja4g4355 251 Gene3D HUPs 38 209 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4355 Lja-Chr4 77095000 77097469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4355 45 202 Plant U-box Gene Family AT5G57035 31.013 1.70e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4355 - - gmx:100527773 313.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g4355 4 77095000 77097469 Lja6g2551 6 54317932 54321135 PCT