Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lja4g4348 | ATGGCTGAATCTGACAAGGAAATAGGAGGTAAGAATGAATTGACAAGTCCAAATGGGTGCAGAGAGCTGGAGAGGCTCCTTCCAATAGCGAACGTGAGCAGGATCATGAAGAAGGCGTTACCAGGCAACGCCAAGATCTCAAAGGAAGCCAAGGAAACGATGCAAGAGTGTTTATCTGAGTTCATCAGCTTCATCACAGCAGAGGCGTCTGATAAGTGCCAGAACGAGAAGAGGAAGACAATCAACGGTGATGATCTTGTGTGGGCCATGACCACTCTGGGTTTTGAAGACTACGTGCAGGCTCTCAAGGGTTACCTTCACAAGTACAGGGACATGGAGGGAGAGAAGACTAATTATTCTTTCATTGGGAGGCAGCAGCAGAATCAGCAGGGTGATGATGATGCTGTTGGTAGTGGGGTGTCAATGCCATCATCATCCACTAGCTATCACCATCAAGGGGTTATGTATGCATCTGGAAATGTTTGGAAGAGCTAG | 495 | 0.4747 | MAESDKEIGGKNELTSPNGCRELERLLPIANVSRIMKKALPGNAKISKEAKETMQECLSEFISFITAEASDKCQNEKRKTINGDDLVWAMTTLGFEDYVQALKGYLHKYRDMEGEKTNYSFIGRQQQNQQGDDDAVGSGVSMPSSSTSYHHQGVMYASGNVWKS* | 165 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lja4g4348 | 164 | SUPERFAMILY | Histone-fold | 24 | 128 | IPR009072 | GO:0046982 | |
Lja4g4348 | 164 | Gene3D | Histone, subunit A | 16 | 138 | IPR009072 | GO:0046982 | |
Lja4g4348 | 164 | PRINTS | CCAAT-binding transcription factor subunit A signature | 73 | 91 | - | - | |
Lja4g4348 | 164 | PRINTS | CCAAT-binding transcription factor subunit A signature | 54 | 72 | - | - | |
Lja4g4348 | 164 | PRINTS | CCAAT-binding transcription factor subunit A signature | 92 | 110 | - | - | |
Lja4g4348 | 164 | Pfam | Histone-like transcription factor (CBF/NF-Y) and archaeal histone | 26 | 90 | IPR003958 | - | |
Lja4g4348 | 164 | PANTHER | CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED | 1 | 155 | IPR027113 | GO:0001228|GO:0006355|GO:0016602 | |
Lja4g4348 | 164 | MobiDBLite | consensus disorder prediction | 126 | 149 | - | - | |
Lja4g4348 | 164 | PANTHER | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-3 | 1 | 155 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lja4g4348 | Lja-Chr4 | 77024736 | 77025382 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lja4g4348 | 1 | 125 | CCAAT-HAP3 Transcription Factor Family | AT4G14540 | 72.000 | 3.73e-59 | 179 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NF-YB | Lja4g4348 | CBFD_NFYB_HMF | 4.4e-27 | CL0012 |