Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4336 ATGGAATTCCAATCTTCATTCCTAGCTATCACCGCACTCCTCTTCTCGCTGCTTTTGCTTGCTAAGATTTTTAAAGGGAGAAGCAGTGTGGTTCATAAACTGCCACCAGGGCCATGGAAGTTACCTATAATAGGGAATCTGCATCAACTGATAGCAGCAGGGCCACTTCCCCACCGTGCTCTTCGAGATCTAGCCCTCAAACATGGACCTATGATGCATCTTCAGATGGGTGAAATTTCTACAATAGTTGTATCATCTCCTGATTTGGCCAAGGACATATTGAAGACACATGATCTCGCTTTTGCACAAAGACCTGAACTCTTCTTTTCTGAAATTTTGGCCTATGATTCAACAGATATTTCCTTTGCTCCATATGGTGAATACTGGAGACAGATGAGGAAGATATGTACCTTAGAGCTTCTGAGTGCCAAAAGGGTTAAGTCTTACTCTTACATTCGGAAAGATGAGGTGGCTAAGCTCATACAATCCATTCACTTGTCTGCATCTGCAGGTTCAACACACAATGTTTCTAAGAGTATTTACTCTTTGATAAGCGCATCGGTTTCGAGGGCAACATTTGGTCATAAAACCACATGTGAAGATGAACTCTTGTTCTTAATCAAGAAAACATTTGAACTGGTTGGAGGTTTTGATGTTTCTGAGTACTTCCCTTCATGGAAATCTCTTCATCTCATAACTCAGATAAAAGCTAAATTGAGGGATACGCAAAAGAAGATGGACAGGATTTTAGACAGCATTGTCAAGGAGCGTCGGTCAAACCCTGACAAGGGTACTGAAACTCTTGTTGATGTTCTTTTGCGTATACAACAAAGTGGCGATCTCGAGTTCCCAATCACAGATGACAACATCAAAGCCGTGATATGGGACATGCTCGTTGCAGGGAGTGATACTTCAGGAATAGTCATAGAGTGGGCTATGTCAGAGATGATGAAAAATCCAAGAGTGAGACACAAGGTACAGGCTGAAATAAGAGAAGCTTTCAAGGGAAAGAAGACTATTGACGAGGCCGATCTACATCAACTTACATACTTTAAGCTAGTGATCAAAGAAACCTTCAGGCTACACCCACCCGGTCCCCTATTGCTGCCGAGAGAATGTAGGGAACCACGCAAGATTGGTGGATATGAAATACCTGTTAAAACTAGAGTTATAGTAAATGCATGGGCACTTAAAAGAGATCCCAACCATTGGTCTGATCCAGAGCAGTTTATACCTGAGAGGTTTCAGGACTCAAGTCTTGACTATAAAGGGACTAACTTTGAGTACCTCCCTTTTGGGGCGGGAAGGAGAATGTGTCCAGGCCTTCTACTTGGCATAGCTAATGTTGAGCTTGCTCTAGCTTCATTACTTTACCACTTCAATTGGGAACTCACGGATGGAATGAAACCAGAGGACTTGGATATGACTGAAATCTTCGGAGCTGTTGTGGGAAAGAAAAACAACCTCTATTTGATTCCAACTCCATATGATCTTGCCATTCATCCTGATGTCAATGCCAATTGA 1524 0.4239 MEFQSSFLAITALLFSLLLLAKIFKGRSSVVHKLPPGPWKLPIIGNLHQLIAAGPLPHRALRDLALKHGPMMHLQMGEISTIVVSSPDLAKDILKTHDLAFAQRPELFFSEILAYDSTDISFAPYGEYWRQMRKICTLELLSAKRVKSYSYIRKDEVAKLIQSIHLSASAGSTHNVSKSIYSLISASVSRATFGHKTTCEDELLFLIKKTFELVGGFDVSEYFPSWKSLHLITQIKAKLRDTQKKMDRILDSIVKERRSNPDKGTETLVDVLLRIQQSGDLEFPITDDNIKAVIWDMLVAGSDTSGIVIEWAMSEMMKNPRVRHKVQAEIREAFKGKKTIDEADLHQLTYFKLVIKETFRLHPPGPLLLPRECREPRKIGGYEIPVKTRVIVNAWALKRDPNHWSDPEQFIPERFQDSSLDYKGTNFEYLPFGAGRRMCPGLLLGIANVELALASLLYHFNWELTDGMKPEDLDMTEIFGAVVGKKNNLYLIPTPYDLAIHPDVNAN* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4336 507 Pfam Cytochrome P450 35 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4336 507 Gene3D Cytochrome P450 29 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4336 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Lja4g4336 507 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4336 507 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4336 507 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4336 507 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4336 507 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4336 507 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4336 507 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4336 507 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4336 507 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 8 496 - -
Lja4g4336 507 PANTHER CYTOCHROME P450 71B11-RELATED 8 496 - -
Lja4g4336 507 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4336 507 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4336 507 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4336 507 SUPERFAMILY Cytochrome P450 35 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4336 Lja-Chr4 76932887 76949132 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4336 10 496 Cytochrome P450 AT3G26300 42.222 9.93e-140 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4336 - K23806 gmx:100794503 694.886