Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4334 ATGGACTTCCAATCTTCCTTCCATGTTATTACCTCACTTTTCTTCTTGCTGCTTTGGCTTGCAAAGATTTATAAGCATAAAATCAAAGTGAGCAATGTGGTTCATAAACTGCCCCCGGGGCCATGGAAGCTACCTCTAATAGGGAACCTGCATCAACTGGCAGCCGCAGGATCACTCCCACACCATACTTTTCGAGATCTAGCCAACAAATATGGACCTCTAATGCATCTTCAACTGGGTGAAAGTTCCACAGTGGTTGTATCATCTCCTGATATGGCGAAGGAGATCTTGAAGACACATGATCTTGCTTTTGCGCAAAGGCCGGAACTCCTTTCTCCTAAAATTTTGGCCTATGAATCAACAGATATTGCCTTTGCTCCCTATGGTGATAACTGGAGACAGATGAGAAAGATATGTACGAAGATATGTACATTGGAGCTTCTGAGCGCCAAAAGGGTTCAGTCTTTCTCCTTTATTCGAGAAGATGAGGTGGCTAAGCTCATACAATCCATTCACTTGTCTGCATCTGCTGGTTCACCATTCAATCTTTCTAAGAGTGTTTTCTCTTTGGTGAACACCTTTCTTTCAAGGGTTGTGTTTGGTAAAAAATCTGAATGTGAAGATGAACTTTTGTCCTTGATCAAGAAAGCAGTGGAACTGACTGCAGGTTTTGATGTTGCTGAGTTGTTCCCATCATTTAAACCGCTTCATCTCATAACACGGATGGAAGCTAAATTGGAGAACATGCACAAGAAGTTGGACAAGATTTTCGACAGCATTGTCAATGAGCATCAATCAGACCATGGAAAGGGTGAAAATCTTGTTGATGTTCTTCTGCGCATGCAACATAGTGGCAATCTCTATATCCCAATCACAGTCAACAACATCAAAGCCGTGATATGGGACATAATCGCTGCAGGGACTGATACATCAGCAACTGCACTGGAGTGGGCTATGGCAGAGCTGATGAAAAATCCTAGAGTGAGGGAGAAGGCACAGGCTGAATTAAGAGAAGCTTTCAAGGGAAAGAAAACTATTAACGAGACTGACCTATGTAAACTTAGTTACTTGAAGTCTGTGATCAAAGAAACCTTGAGGTTACACCCGCCTGCTCCTTTATTGGTCCCAAGAGAGTGCAGGGAAGCATGCAAGATTGGTGGATATGAAATACCTGTTAAGACCAAAGTGATAGTAAATGCATGGGCACTTGGAAGAGATCCCAACCATTGGTATGATGCAGAGAAGTTTATACCTGAAAGGTTTCATGAGACAAGTGTTGATTTTAAAGGGAATAACTTTGAGTACATCCCTTTTGGGGCAGGAAGGAGAATATGTCCAGGCATTTTACTTGGCTTAGCTAATATTGAGCTTCCTCTTGCTGCATTTCTCTACCACTTCGATTGGGCACTCCCCAATGGTATGAAATCAGAGGACTTGGATATGATAGAAACCTGGAGCTGCAGTAGGGAGGAAAAATAA 1479 0.4253 MDFQSSFHVITSLFFLLLWLAKIYKHKIKVSNVVHKLPPGPWKLPLIGNLHQLAAAGSLPHHTFRDLANKYGPLMHLQLGESSTVVVSSPDMAKEILKTHDLAFAQRPELLSPKILAYESTDIAFAPYGDNWRQMRKICTKICTLELLSAKRVQSFSFIREDEVAKLIQSIHLSASAGSPFNLSKSVFSLVNTFLSRVVFGKKSECEDELLSLIKKAVELTAGFDVAELFPSFKPLHLITRMEAKLENMHKKLDKIFDSIVNEHQSDHGKGENLVDVLLRMQHSGNLYIPITVNNIKAVIWDIIAAGTDTSATALEWAMAELMKNPRVREKAQAELREAFKGKKTINETDLCKLSYLKSVIKETLRLHPPAPLLVPRECREACKIGGYEIPVKTKVIVNAWALGRDPNHWYDAEKFIPERFHETSVDFKGNNFEYIPFGAGRRICPGILLGLANIELPLAAFLYHFDWALPNGMKSEDLDMIETWSCSREEK* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4334 492 Gene3D Cytochrome P450 31 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4334 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Lja4g4334 492 Pfam Cytochrome P450 38 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4334 492 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4334 492 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4334 492 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4334 492 SUPERFAMILY Cytochrome P450 38 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4334 492 PANTHER CYTOCHROME P450 71B11-RELATED 7 487 - -
Lja4g4334 492 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4334 492 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4334 492 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4334 492 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4334 492 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4334 492 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4334 492 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4334 492 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4334 492 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4334 492 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 7 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4334 Lja-Chr4 76879756 76890921 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4334 37 486 Cytochrome P450 AT5G25120 45.077 4.65e-137 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4334 - K15472 gmx:100794503 773.467