Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4333 ATGGAATTCCAATCTTCCTTTCTTGTTATTATCGCACTCCTGTTCTCACTGCTCTGCCTTGCAAAGATTTATAAGCAGAAAATTAAAGTGAGGAGCACTGCGGTTCATAAACTGCCACCAGGACCATGGAAGTTGCCTCTAATAGGGAATCTCCATCAACTTGCAACAGCAGGATCACTTCCACACCATACTTTTCGAGATCTAGCTAACAAATATGGACCTCTAATGCATCTTCAATTGGGTGAAAGCTCTACAGTGGTTGTATCATCTCCTGATATGGCGAAGGAGATCATGAAGACGCATGATCTTGCTTTTGCGTCGAGGCCAGAACTCCTTTCTCCTAAAATTTTGGCCTATGGATCAACAGATATTGCCTTTGCTCCATATGGTGATTACTGGAAACAAATGAGGAAGATATGTACGTCAGAGCTTCTGAGCCCCAAAAGGGTTCAGTCTTTCTCCTTTATTCGAGAAGATGAGGTAGCTAACCTCATACAATCCATTCACTTGCTTGCATCTACTGGTTCACTATTCAATCTTTCTAAGAGTGCTTCCTCTTTGATAAACACCATTATTTCAAGGGCCGCGTTTGGTAAAAAATCTGAGTGCGAAGATGAACTTTTGTCCTTGATCAAGAAAGCAGCGGAACTAACTGCAGGTTTTGATCTTGCTGAGTTGTTCCCATCATTGAAACCTCTTCATCTAATAACTCGGATGAAAACTAAATTGGAGAACATGCACAAGAAGTTCGACAAGGTTTTAGACAATATTGTAAACGAGCATCAATTAGACCATGGCAATGGTGAAAATCTCGTTAATGTTCTTTTGCGCATGCAACAAAGTGACAATCTCGATATCCCAATCACAGTCAACAACATCAAAGCCGTGATATGGGACATAATCATTGCAGGCACTGATACTTCAGCAACAACAATAGAGTGGGTTATGGCAGAGCTGATGAAAAATCCAAGAGTGAGGGAGAAGGCACAGGCTGAATTAAGAGAAGCTTTCAGGGGGAAGAAAACTATTAACGAAACTGACCTATGTGAACTTAGTTACTTAAATTTTGTGATCAAAGAAACCTTGAGGTTACACCCACCTGCTCCTTTACTAGTCCCAAGAGAATGCAGGGAAACATGCAAAATTGGAGGATATGAAATACCTATAAAGACTAAAGTGATAGTAAATGCATGGGCACTTGGAAGAGATCCTCAACATTGGTATGATGCAGAGAAGTTTATACCCGCAAGGTTTCACGAAACAAGTGTTGATTTTAAAGGGAATAACTTTGAGTACATTCCTTTTGGGGCAGGAAGGAGAATATGTCCAGGCATTTTACTTGGCTTAGCTAATATTGAACTTGCTCTTGCCGCATTACTCTACCACTTTGATTGGAAACTCCCCAATAGTATGAAACTAGAGGACTTGGATATGATAGAAACCTATGGAGCTGCAGCGGGAAGGAAAAATAATCTATACTTGATTCCAACTCCATATAATTATGCCCTTCATCGTGATTTCAATGCCAATTAA 1533 0.4038 MEFQSSFLVIIALLFSLLCLAKIYKQKIKVRSTAVHKLPPGPWKLPLIGNLHQLATAGSLPHHTFRDLANKYGPLMHLQLGESSTVVVSSPDMAKEIMKTHDLAFASRPELLSPKILAYGSTDIAFAPYGDYWKQMRKICTSELLSPKRVQSFSFIREDEVANLIQSIHLLASTGSLFNLSKSASSLINTIISRAAFGKKSECEDELLSLIKKAAELTAGFDLAELFPSLKPLHLITRMKTKLENMHKKFDKVLDNIVNEHQLDHGNGENLVNVLLRMQQSDNLDIPITVNNIKAVIWDIIIAGTDTSATTIEWVMAELMKNPRVREKAQAELREAFRGKKTINETDLCELSYLNFVIKETLRLHPPAPLLVPRECRETCKIGGYEIPIKTKVIVNAWALGRDPQHWYDAEKFIPARFHETSVDFKGNNFEYIPFGAGRRICPGILLGLANIELALAALLYHFDWKLPNSMKLEDLDMIETYGAAAGRKNNLYLIPTPYNYALHRDFNAN* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4333 510 SUPERFAMILY Cytochrome P450 39 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4333 510 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 10 499 - -
Lja4g4333 510 Gene3D Cytochrome P450 32 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4333 510 Pfam Cytochrome P450 39 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4333 510 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4333 510 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4333 510 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4333 510 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4333 510 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4333 510 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4333 510 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4333 510 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4333 510 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4333 510 PANTHER CYTOCHROME P450 71B11-RELATED 10 499 - -
Lja4g4333 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Lja4g4333 510 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4333 510 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4333 510 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4333 Lja-Chr4 76876443 76878205 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4333 7 497 Cytochrome P450 AT5G25140 42.656 7.27e-139 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4333 - - gmx:100794503 768.459