Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4332 ATGGAACTCACACCTTCCTCCCTGGTAATTACCTCACTTCTCTTCTTGCTTCTTTGGCTTGCAAAGATTTCTATGCAGAGAATCAAAGGGAAGAGTGATGTGGTTCATAAGTTGCCCCCAGGGCCAAGGAAGTTGCCTCTAATAGGGAACCTACATCAACTGGCAGTGGCAGGAACACTTCCACACCATGCTCTTCGAGATCTAGCATGCAAATATGGACCTCTAATGCATCTTCAACTGGGAGAAATTTCTGCAGTGGTTGTATCATCCCCAGATATGGCAAAGGAGATAATGCATACACATGATCTCACTTTTGCGCAGAGGCCAGAACTACTTTGTTCTAAAATTTTGGTTTATGATTCAGGAGATATCATATTTGCTCCATATGGTGATTATTGGAGACAAATGAGGAAGTTATGTAAAATAGAGCTTCTGAGTGCCAAAAGGGTTCAATCTTTCTCCTTTATTCGAGAAGGTGAGGTGGCTAAGCTCATAGAATCCATCAAGTTATCAGCATCTTCAGGTTCACCAATCAATCTCACTAAAAAAACTTTCTCTTTGATAAGCACCTTTGTTTCAAGGGCAGTGTTTGGTAAAAAATCTGAGTGTGAAGATGAACTTATATCTTTGCTCAAGAAAGGAGTGGAGCTGTCAGGAGGTTTTGATATTGCAGATTTGTTCCCTTCGCGAAAAGGTATACATTTCATAACTGGGATGAAATCTAAGTTGGAGCATATGCACAAGGAGCTGGACAAGATCTTAGAAAACATCATCAACGAGCATCAATCAAACCAAGACAAGGGTGAAACTCTCGTTGATGTTCTTCTGGGTATACAACAAAATGAAGATCTCGAGTTCCCAATAACAAACGACAACATCAAAGCTGTGATATGGGACATGTTTGGTGCTGGGACTGATACTTCAGCAACGATAATAGAGTGGGCTATGTCAGAGTTGATGAAGAACCCAAGAGTAATGGAGAAAGCACAAGCTGAAATACGAGAAGCTTTCAGGGGTAAGGAAACGCTTGACGAGACTGATGTACATAAACTTAGTTACTTGAAATTAGTGATCAAAGAAACCATGAGATTACACCCACCTGGTGCTTTGTTGCTCCCGCGAGAATGCAGGGAACCGTGCAAGATTGGTGGGTATGAAATACCTATCAAGACTAAAGTGATAGTAAATGCTTGGGCACTTGGAAGAGATCCCAACCATTGGTATGATCCTGAGAAGTTCGTACCTGAGAGGTTTCATGACACAAGTGTTGATTTTAAAGGGAACAACTTTGAGTACATCCCTTTTGGGGCAGGAAGGAGAATATGCCCTGGCATTTTACTTGGCTTAGCTAATATTGAACTTCCTCTAGTTGCATTACTCTACCACTTTAATTGGGAACTCCCAAATGGAATGGACCCTGAGGACTTGGACATGAATGAAACATTTGGAGCTGCTGTGGGAAGGAAAAACAACTTGTATCTGATTCCAATTCCATATAATTATGCCCTTCACTGTGATGCCAATGTCAATTGA 1533 0.4136 MELTPSSLVITSLLFLLLWLAKISMQRIKGKSDVVHKLPPGPRKLPLIGNLHQLAVAGTLPHHALRDLACKYGPLMHLQLGEISAVVVSSPDMAKEIMHTHDLTFAQRPELLCSKILVYDSGDIIFAPYGDYWRQMRKLCKIELLSAKRVQSFSFIREGEVAKLIESIKLSASSGSPINLTKKTFSLISTFVSRAVFGKKSECEDELISLLKKGVELSGGFDIADLFPSRKGIHFITGMKSKLEHMHKELDKILENIINEHQSNQDKGETLVDVLLGIQQNEDLEFPITNDNIKAVIWDMFGAGTDTSATIIEWAMSELMKNPRVMEKAQAEIREAFRGKETLDETDVHKLSYLKLVIKETMRLHPPGALLLPRECREPCKIGGYEIPIKTKVIVNAWALGRDPNHWYDPEKFVPERFHDTSVDFKGNNFEYIPFGAGRRICPGILLGLANIELPLVALLYHFNWELPNGMDPEDLDMNETFGAAVGRKNNLYLIPIPYNYALHCDANVN* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4332 510 Coils Coil 240 260 - -
Lja4g4332 510 PANTHER CYTOCHROME P450 71B11-RELATED 7 499 - -
Lja4g4332 510 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 7 499 - -
Lja4g4332 510 Pfam Cytochrome P450 39 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4332 510 Gene3D Cytochrome P450 33 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4332 510 SUPERFAMILY Cytochrome P450 39 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4332 510 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4332 510 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4332 510 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4332 510 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4332 510 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4332 510 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4332 510 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4332 510 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4332 510 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4332 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Lja4g4332 510 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4332 510 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4332 510 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lja4g4332 510 Coils Coil 326 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4332 Lja-Chr4 76873320 76874981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4332 38 497 Cytochrome P450 AT5G25120 45.279 1.80e-145 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4332 - - gmx:100794503 787.334