Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4296 ATGAAAGCCACAAAGAAACAGAGAGGATGCAGAGCATTGTGTTGTAGCTGCAGATTCAGTGTTTCTTCCTCAGAGGAAGTAGAAAGCTCTGCCTCTGATAGGTTCCCTTCTGTTTCTACTCTATCACATGCAATGGTGCAAGAGAGACTTGACCAAATGATTAGAGAAAGGGTGGAAGCAAGACCAAGACATGTACAGAGAAGAAAGCAGCAAAACAGAGAAAGAACCAAGTTCGTTGTGATGTTGGCAATGGAAAAGAGCTCTAATGATCCGAGGGAGGATTTTAGAAAGTCCATGTTGGAGATGATAACAGTGAATCGCCTTCAAGATGCCAACGACCTTCGTGGTCTTTTGAACTATTATATCTCGATGAACTCAGAAGAGTACCATGGTCTTGTACTTGAGGTTTTTCATGAGGTTTGTTCTGATTTGTTCTTATCATGTAAATGTCAGTTGTAA 459 0.4118 MKATKKQRGCRALCCSCRFSVSSSEEVESSASDRFPSVSTLSHAMVQERLDQMIRERVEARPRHVQRRKQQNRERTKFVVMLAMEKSSNDPREDFRKSMLEMITVNRLQDANDLRGLLNYYISMNSEEYHGLVLEVFHEVCSDLFLSCKCQL* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4296 152 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 83 145 IPR006458 -
Lja4g4296 152 Pfam Transcriptional repressor, ovate 88 145 IPR006458 -
Lja4g4296 152 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 7 146 IPR038933 GO:0045892
Lja4g4296 152 ProSiteProfiles OVATE domain profile. 84 143 IPR006458 -
Lja4g4296 152 PANTHER TRANSCRIPTION REPRESSOR-RELATED 7 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4296 Lja-Chr4 76592863 76593321 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lja4g4296 Ovate 2.6e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4296 - - var:108330150 207.994