Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4284 ATGATCCTCTATTCTCTGCATCTTCCAACTCCATCTTCTTCTCCTCACTCTCACTCTCACTCTCACTCTCCTAACCCTATCCCCTACCGTCACCCAAACACAAACGGTTACATCAAGTTCAGAACAACCTACCGCGAAAACCTTCGTTACCTCACAACATTAACCTTAATCCACCCAAAAACCCAACCCAACAACCTCCCTCTCCCCGACGCCGTCGACCACATCCTCGCCACCGTCAGCTTCCTCAAATCCCATTCCTTCTCCGACGCCGACATCCCCCGCCTCGCCCGCCACTTCCCCCACCTATTCTCCACCTCATTCGACCCCGCCGACATCGCCCCCGTCTTCCGGTTCCTCTCCGGCGACCTCCTCGCCACCGCCGAAGAGTCCCGCGGCCTCATACTCCGCTGCCCGAACCTCTTGTTCTCCGACGTCAACCTCTGCCTCCGGCCGACGCTACAGTTCCTCCGGGAGGTCGGGGTGTGTGGTCTGAACCGGCCCACGAACCGGAACGCGCACCTGCTGAACACGCGCGTGGGGAAGCTGCGCGTGAAGGTGAGGTTTCTGGAGGAGGACGTGGGGTTGTCGTATGAGGAGGCGGTTAACGTCTGCGCGAGGTTGCCGGCGATCTTCGGGTACGACGTGGAGAACAATTTGTGGCCCAAGTTTGCGTTTCTGGTGGAGGAGATGGAGAGGGATTTGGAGGAGTTGAAGAAGTTTCCTCAGTATTTTGGGTTCAGTTTGGAGAAGAGGATTGTGCCGAGGCATTTTCATTTGAAGGAGAGGGGCGTGAGGATCCCATTGAACCGAATGTTGATGTGGGGTGATGACAAGTTCTACGCCAAGTGGAAGTAG 855 0.5673 MILYSLHLPTPSSSPHSHSHSHSPNPIPYRHPNTNGYIKFRTTYRENLRYLTTLTLIHPKTQPNNLPLPDAVDHILATVSFLKSHSFSDADIPRLARHFPHLFSTSFDPADIAPVFRFLSGDLLATAEESRGLILRCPNLLFSDVNLCLRPTLQFLREVGVCGLNRPTNRNAHLLNTRVGKLRVKVRFLEEDVGLSYEEAVNVCARLPAIFGYDVENNLWPKFAFLVEEMERDLEELKKFPQYFGFSLEKRIVPRHFHLKERGVRIPLNRMLMWGDDKFYAKWK* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4284 284 Pfam mTERF 132 279 IPR003690 GO:0003690|GO:0006355
Lja4g4284 284 Gene3D Transcription termination factor 3, mitochondrial 58 284 IPR038538 -
Lja4g4284 284 PANTHER CGI-12 PROTEIN-RELATED 24 284 IPR003690 GO:0003690|GO:0006355
Lja4g4284 284 MobiDBLite consensus disorder prediction 8 32 - -
Lja4g4284 284 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 24 284 - -
Lja4g4284 284 SMART mt_12 131 162 IPR003690 GO:0003690|GO:0006355
Lja4g4284 284 SMART mt_12 93 126 IPR003690 GO:0003690|GO:0006355
Lja4g4284 284 SMART mt_12 165 196 IPR003690 GO:0003690|GO:0006355
Lja4g4284 284 SMART mt_12 201 233 IPR003690 GO:0003690|GO:0006355
Lja4g4284 284 SMART mt_12 234 265 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4284 Lja-Chr4 76471150 76472952 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lja4g4284 mTERF 2.6e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4284 K15032 - gmx:100812333 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g4284 4 76471150 76472952 Lja4g4284 4 76471150 76472952 ECH