Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4280 ATGGAAAGACCATTTCCTTTGATTCTGCTAATTGCCACACTTGTTATGGCAATGCCACTTTCATTTGGGGTGGAAGAAAACCAACTCTCCTATAACTACTACATGTTTTCATGCCCAAACTTGGAAACTGTTATCCAGAAAGAATTGCTAAGAGTATTCCTGCTAAATCCTACTGCACCAGCAGCATTTCTCAGGCTCATGTTTCATGACTGCCAAGTTCAGGGATGTGATGCCTCAATTTTGTTGGACTCTGAGACCTCTGAAATGGCTTCTTCAAGAAACTTTGGCATCAGAATGAGGGAAGCAATCAGCAACATAAAATCAACATTAGAAGAAGAGTGTCCAGGACAGGTGTCATGCGCAGACATCATTGTACTAGTTGCTAAGGAATCAGTGTCTTACACTGGGGGACCCCAAATTCAGATCCCACTCGGAAGAAAAGACACCAAAACAACCCCAAGTTTCAAGGAGGCTGATGCTAAGCTTCCTCCACCGTCAATACCGGTTGATGAATTTATATCACTTTTCAAAGGAATGAGCATTGAAGAATCAGTTTCCATTTTAGGTGCACATACACTTGGAGTTGGACACTGCTTAAACATTGTTGGAAGATTGTATGATCCAACACAACGGAACCTGATGGATTTGGAGTTTGAAGCCTCACTAAAACTAGTGTGTCCAGCTGAGATTCCTCTTACAAACCTCACACCAGTGCCTAATGACTTGACCCCCGTGATATTTGACAACCATTATTACAGAGACATTATTTTGGGGAGAGGCTTGTTTGGTATTGACTCCAACATTTCCAGAGATCCACGAACAGCACCCTATGTCGCGAGGTTTGCTGTGGATCAGAATTACTTCTTCGAGGTTTTCGCTTCTGCATTTGTTAAGCTTTCTGCTACCGATGTTCTCACAGATGAGCAGGGTGAGGTCCGAAGGCAATGCAACCAGTTAAATTAA 963 0.4278 MERPFPLILLIATLVMAMPLSFGVEENQLSYNYYMFSCPNLETVIQKELLRVFLLNPTAPAAFLRLMFHDCQVQGCDASILLDSETSEMASSRNFGIRMREAISNIKSTLEEECPGQVSCADIIVLVAKESVSYTGGPQIQIPLGRKDTKTTPSFKEADAKLPPPSIPVDEFISLFKGMSIEESVSILGAHTLGVGHCLNIVGRLYDPTQRNLMDLEFEASLKLVCPAEIPLTNLTPVPNDLTPVIFDNHYYRDIILGRGLFGIDSNISRDPRTAPYVARFAVDQNYFFEVFASAFVKLSATDVLTDEQGEVRRQCNQLN* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4280 320 CDD secretory_peroxidase 28 317 IPR033905 GO:0004601|GO:0042744
Lja4g4280 320 ProSiteProfiles Plant heme peroxidase family profile. 28 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g4280 320 Gene3D Peroxidase, domain 2 163 299 - -
Lja4g4280 320 PANTHER PEROXIDASE 25-RELATED 22 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4280 320 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g4280 320 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g4280 320 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g4280 320 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g4280 320 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g4280 320 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4280 320 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4280 320 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4280 320 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4280 320 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4280 320 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4280 320 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4280 320 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4280 320 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4280 320 Gene3D - 32 320 - -
Lja4g4280 320 PANTHER PEROXIDASE 22 318 - -
Lja4g4280 320 Pfam Peroxidase 47 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g4280 320 SUPERFAMILY Heme-dependent peroxidases 28 320 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4280 Lja-Chr4 76439163 76441398 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4280 54 320 Peroxidase AT3G17070 48.561 9.41e-85 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4280 K00430 - gmx:100806951 483.411