Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4277 ATGATTAAGATGGGTGAAGCTGAGAGCAAGCCATCAATTGAGGTTGTGGTATGTGCTAATTCTATGAACAATACTAGTGCAAACAACCACCAGTCACACCCATCACATTCACCAATCTTAACCAAGATCCATGCTGGCTACTTTTTCATTAGTCTTTCATTTGGTGCACAAGCTTTGCTGTGGAAGAGTTTGAGTGAACGTAACAAGGACTCACAAACTCTATGGCAAAGTTTTAATTTGATGCCACATGTTGCATTTCTACTACTATGGTCTCTTTCAGTGCTCATTGCAACTACTCTGTCTTTTCTTTACATGCTCAAATGCATCTTCCACTTTGATATGGTGAAGGAGGAGTTTTCACACTATATTGGAGTGAACTACATGTATGCTCCTTGGATTTCATGGCTTCTCATGCTTCAATCAGCACCAATGATTGTTCCCAGAACTTTTCACTACCAATTTCTCTGCTTGGCCTTTTCATTTGCAATATTGCTGCTTGATGTCAAACTCTATGGACAATGGTTCACAACAGAAAAGAGGTTTCTGTCAGTGGTTGCTAACCCTGTGAGCCATGTTTCAGTTATAGGGAACTTGGTGGCGGCTCAAGTGATAACAGAAATTGGTTGGAAAGAGTGTGGGATTTCAATGTTCTCACTTGGAATGGTTCATTATTTGATTCTGTTTGTGACACTGTATCAACGTTTGACAAGTAGCAACCAGTTTCCCACAGTGCTGAGGCCAGCTTACTTCTTGTTTTTTGCTGCACCAAGCATTGCAAGTTTGGCTTGGAAATCCATCACAGGTGGTTTTCTCATCCCATCAAGGATGCTGTTCTTTCTGTCATTGTTCCTTTTCATGTCTCAGGCTTGCAGACCAAACTTCTTCAAGAAATCTATGAGAAAATTAACAGTCACTTGGTGGGTGTGCTCATTCCCTTTAACCTTCCTTGGTCTAGCTTGTGCTGAATATTCTCAAGAAGTGGAAGGTAGCATGGCCTCTGCGTTAATGCTGGTGATATGTGTTGTCTCGGTGCTGGTTTTCATTTCTCTGATGCTCATCTCTGTGCTCAAAATTGAGAGGCTGCTGCTAAAAAAAGCTCCTATTAGTAACTCTAAATGA 1119 0.412 MIKMGEAESKPSIEVVVCANSMNNTSANNHQSHPSHSPILTKIHAGYFFISLSFGAQALLWKSLSERNKDSQTLWQSFNLMPHVAFLLLWSLSVLIATTLSFLYMLKCIFHFDMVKEEFSHYIGVNYMYAPWISWLLMLQSAPMIVPRTFHYQFLCLAFSFAILLLDVKLYGQWFTTEKRFLSVVANPVSHVSVIGNLVAAQVITEIGWKECGISMFSLGMVHYLILFVTLYQRLTSSNQFPTVLRPAYFLFFAAPSIASLAWKSITGGFLIPSRMLFFLSLFLFMSQACRPNFFKKSMRKLTVTWWVCSFPLTFLGLACAEYSQEVEGSMASALMLVICVVSVLVFISLMLISVLKIERLLLKKAPISNSK* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4277 372 Gene3D - 38 362 IPR038665 -
Lja4g4277 372 CDD TDT_SLAC1_like 44 352 - -
Lja4g4277 372 Pfam Voltage-dependent anion channel 43 352 IPR004695 GO:0016021|GO:0055085
Lja4g4277 372 PANTHER C4-DICARBOXYLATE TRANSPORTER/MALIC ACID PROTEIN 4 370 - -
Lja4g4277 372 PANTHER - 4 370 IPR030183 GO:0006873|GO:0008308|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4277 Lja-Chr4 76418735 76420517 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4277 - - lja:Lj4g3v0135660.1 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g4277 4 76418735 76420517 Lja4g4277 4 76418735 76420517 ECH
Lja3g1060 3 11006484 11009183 Lja4g4277 4 76418735 76420517 ECH