Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4252 ATGGCTCCCAAAGCTTTCATCATCTTTTTGTCTCTGTTATCCCTTTCAGCACTGTCCCTTCTGAGCCCTTCTTCTGCACAAGAAGATGTTCAGGACACTGGCCTTGCCATGAACTTCTACAAGGAAACATGTCCTCAGGCTGAAGACATCATCACAGAACAAGTCAAGCTTCTCTACAAGCGCCACAAGAACACCGCTTTCTCCTGGCTCAGGAACATCTTCCATGATTGTGCTGTTCAAAGTTGTGATGCTTCATTGTTGCTGGATTCCACAAGAAAAACCTTGTCTGAGAAGGAAACTGATAGGAGCTTTGGGTTGAGGAACTTCAGGTACATTGAGACCATCAAGGAAGCTCTGGAGAGGGAGTGCCCTGGAGTTGTTTCCTGTTCTGATATCCTTGTTCTCTCTGCCAGAGATGGCATTGCTGCGCTGGGAGGACCCCATATCCCTCTTAGAACTGGAAGAAGGGATGGGAGAAGAAGCAGAGCTGATGTGGTTGAGCAGTTTCTTCCTGACCACAATGAGTCCATTTCTGCAGTTCTTGACAAGTTTGGTGCCATGGGAATTGACACCCCTGGCGTGGTTGCTTTGCTTGGAGCACACAGTGTTGGTAGAACTCACTGTGTGAAGCTGGTGCACCGTTTGTACCCAGAGGTTGATCCAGCTTTGAATCCAGACCACATCCCCCACATGCTGAAGAAGTGCCCTGATGCCATTCCTGATCCCAAGGCCGTGCAGTACGTGAGGAACGACCGCGGCACACCCATGATTCTGGACAACAACTACTACAGGAACATCTTGGACAACAAGGGCCTGTTGTTAGTGGATCACCAACTAGCCAATGACAAGAGGACCAAGCCTTATGTGAAGAAAATGGCCAAGAGCCAGGACTATTTCTTCAAGGAGTTTTCTAGAGCTATTACCTTGCTCTCTGAGAACAACCCTCTCACTGGCACAAAGGGTGAGATCAGAAAGCAGTGCAATGTTGCCAACAAGCACCATGAGGATGCTTAA 1014 0.4852 MAPKAFIIFLSLLSLSALSLLSPSSAQEDVQDTGLAMNFYKETCPQAEDIITEQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKETDRSFGLRNFRYIETIKEALERECPGVVSCSDILVLSARDGIAALGGPHIPLRTGRRDGRRSRADVVEQFLPDHNESISAVLDKFGAMGIDTPGVVALLGAHSVGRTHCVKLVHRLYPEVDPALNPDHIPHMLKKCPDAIPDPKAVQYVRNDRGTPMILDNNYYRNILDNKGLLLVDHQLANDKRTKPYVKKMAKSQDYFFKEFSRAITLLSENNPLTGTKGEIRKQCNVANKHHEDA* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4252 337 Gene3D - 38 331 - -
Lja4g4252 337 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4252 337 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4252 337 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4252 337 PRINTS Plant peroxidase signature 192 204 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4252 337 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4252 337 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4252 337 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4252 337 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4252 337 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4252 337 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g4252 337 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g4252 337 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g4252 337 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g4252 337 PRINTS Haem peroxidase superfamily signature 193 208 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g4252 337 PANTHER PEROXIDASE 42 25 330 - -
Lja4g4252 337 SUPERFAMILY Heme-dependent peroxidases 35 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja4g4252 337 Pfam Peroxidase 53 295 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g4252 337 ProSiteProfiles Plant heme peroxidase family profile. 34 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g4252 337 Gene3D Peroxidase, domain 2 171 310 - -
Lja4g4252 337 PANTHER PEROXIDASE 25-RELATED 25 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4252 337 CDD secretory_peroxidase 34 329 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4252 Lja-Chr4 76057713 76060583 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4252 7 334 Peroxidase AT4G21960 79.878 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4252 K00430 - gmx:547548 605.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g4252 4 76057713 76060583 Lja4g4252 4 76057713 76060583 ECH