Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4238 ATGGCGGCGTTGGCAGAACCACTGCAACAAGAGCCTCTTCCTCCTCTTTCTTCAGGTGCTGAATCCAACCCATCAGACTGCGTCATCTTCTTCGGTCTCTGCCTCGCTCTCGGAATCGCTTGCAGACACCTCTTGCGTGGAACCAGAGTTCCTTACACTGCTGCGTTACTCATCATTGGCATTGCTCTTGGATCAATAGAATATGGCACTCATCATCATCTGGGAAAGATTGGAGATGGAATTCGTCTTTGGTCAGATATTAATCCTGAACTTCTGTTAGCTGTGTTTCTTCCGGCTCTCCTTTTCGAGAGCTCATTCTCAATGGAAATTCACCAAATTAAGAGGTGTATTGCACAAATGATGTTACTAGCTGGTCCAGGTGTTGTGCTTTCGACCTTTTGTCTTGGAACTGTTTTGAAGCTTACTTTTCCATATAACTGGACTTGGAAAACATCACTATTGCTTGGGGGACTTCTGAGTGCAACCGATCCTGTAGCTGTTGTGGCCTTGTTGAAAGAGCTCAGTCCTAACAAAAAGCTAAGGACAATAATTGATGGGGAATCCTTGATGAATGATGGGGTGTCTGTTGTGGTGTATACCCTTTTCTATCGGATGGTTCTTGGAGAGACCTTCAACTGGGTTGCTGTAATCAAATTTCTAGCACAAAATTCACTTGGAGCTGTAGGAATAGGGCTTGCTTTTGGGATAGCATCTGTGTTGTGGCTTGGGTTTATTTTTAATGATACAGTGATTGAGATTTCTCTGACACTGGCTGTTAGCTACCTTGCTTACTTCACTGCTCAAGAGGGTGCAGATGTTTCTGGTATCTTGACCGTGATGACATTGGGAATTTTCTATTCTGCATTTGCAAGGACAGCTTTTAAGGGTGAAAGTCATCAAAGCTTACATTACTTCTGGGAAATGGTTGCTTATATTGCTAACACCTTAATTTTCATTTTGAGTGGAGTTCTTATAGCTGAAGGAATACTTAAAGATTACCATTTTTTTCATCAGGGAAAATCATGGGTCTACCTCTTGCTTCTCTATGCATATGTTCAAGTGACTCGATGCATTGTAGTTGGAGCTTTATTTCCCTTTCTTAGATATTTTGGATATGGTTTGGATTGGAAAGAAGCTATTATTCTCATCTGGTCAGGATTGCGAGGGGCAGTTTCCTTGTCACTTTCAATAGCAGTTAAGCGTTCTAGTGGCAGATCAATGGAATTGACTGCAGAGACAGGAACAATGTTTCTTTTCTTCACTGGTGGAATTGTGTTCTTAACACTTGTAGTAAATGGTTCAACTGCACAGTTCATTTTACACTTACTTGACATGGATAAGTTATCAGCGGTCAAGACATGTATCCTTGATTTTACAAAGTATGAAATGTTGAATAAAGCATTAGAGGCTTTTGGTGAGCTCGGAGATGATGAGGAACTTGGGCCTGCTGACTGGCCCACAGTGAAGAGATATATCTCGTGCTTAAATTTCATTGAAGGTGAACGAATGCACCCCCATGGAGCATCTAAAGTTGATGGTAACCTTGATCCTATGAATTTGAAAGACATACGAGTACGCCATCTGAATGGTGTCCAAGCTGCTTACTGGGAGATGCTTCACGAAGGAAGAATTACTCAAACAACAGCAAATATCCTAATGCTGTCAGTGGAGGAAGCGATAGATTTGGCTTCATCTGAGCCTCTGTGTGACTGGAAAGGCTTAAAAGCTAACATACACTTTCCAAATTACTACAAGTTCCTCCAATTAAGGATGTTCCCACCGAAGTTAGTTGCATACTTCACTGTGGAAAGGTTGGAATCTGCATGTTATATTTGTGCTGCATTTCTTCGTGCCCACAGAATTGCTCGACGACAATTACACAACTTTATAGGTGACAGCAATGTTGCTTCTGCTGTCATCAATGAAAGTGTTATAGAAGGAGAAGAAGCACGAAAGTTCCTTGAAGATGTTCATGTAACATCCCCTCAGATTTTGCGTGATGTAAAAACAAGGCAAGCAATATATGTAGTGCTAAATCATTTAATTCTATATGTCCAAAACCTTGAGAAGGCTGGGATATTGGAAGAGAAAGAGATGCTACATCTTCATGATGCTGTCCAGACTGATTTAAAAAAATTGCATAGAAATCCTCATTTGGTTAAGCTTCCTGAACTAAGCAATATACATCCTATGTTGGGGGCTCTGCCATCTTCGATTCGTGAACTACTTGCAAGCAGTATCAAGGAAAGGATGAAATTGGGTGGTTTGGTCCTTTTTGAGGAAGGTGCCAAATCTAGTGGTATTTGGTTAATTTCTAATGGAGTGGTGAAGTGGGAAAGCAAGATGATAAGGAACAAGCCTCCTTTTCATCCAACTTGCATGCATGGGAGCACATTGGGTCTTTATGAAGTGCTGACAGGAAGACCATATATCTGTGATGTCATCACAGACTCCATCGTGTTCTGCTATTTTCTTGAAGCTGATAAGATAATTTCATGTCTCAAATCAGACCCTTCAATGGAAGACTTCCTATGGAAGGAAAGTGCTATTTTTCTTTCCAAACTATTGCTTCCCCAGATATTTGAGAAACTAGCTGTGCAAGATATAAGAGCTCTTATTGCTGAAAGATCTGAAATAACCATATACATTGGAGGGGAATCAATAAAAATCCCTCATCATTCAGTTGCCTTCTTACTAGAAGGATGTGTCAAGACTCAAGGTCCTCAAGAGCTTGTAACCGCACCAGCAGCCCTTCTTCCTTCTCATGGGAATCAAAGCTTCCAAAGTTTGGCAATTTCAGGTACTGAGGAAGCTAGTTTTACTCATCAAGGATCTTGTTATTTGGTCGAAACTAGAGTGAGGGTAATCGTGTTTGACATTGCAGCGTTTGAGGCTAATGCTGCTAGAGAACATAGTGATCTTATGAGTTGGCCTGAACATTTCTACAATCAGAAGCACCATAAGCAGAGTTCTGAAAGGATTGGGCAACATTCCAGGAGTTTGTCTGCAAGGGCATTGCAGATCAGCATTTATGGAACGAAGTTTGTCAATGGATCTTGCTAG 3063 0.4123 MAALAEPLQQEPLPPLSSGAESNPSDCVIFFGLCLALGIACRHLLRGTRVPYTAALLIIGIALGSIEYGTHHHLGKIGDGIRLWSDINPELLLAVFLPALLFESSFSMEIHQIKRCIAQMMLLAGPGVVLSTFCLGTVLKLTFPYNWTWKTSLLLGGLLSATDPVAVVALLKELSPNKKLRTIIDGESLMNDGVSVVVYTLFYRMVLGETFNWVAVIKFLAQNSLGAVGIGLAFGIASVLWLGFIFNDTVIEISLTLAVSYLAYFTAQEGADVSGILTVMTLGIFYSAFARTAFKGESHQSLHYFWEMVAYIANTLIFILSGVLIAEGILKDYHFFHQGKSWVYLLLLYAYVQVTRCIVVGALFPFLRYFGYGLDWKEAIILIWSGLRGAVSLSLSIAVKRSSGRSMELTAETGTMFLFFTGGIVFLTLVVNGSTAQFILHLLDMDKLSAVKTCILDFTKYEMLNKALEAFGELGDDEELGPADWPTVKRYISCLNFIEGERMHPHGASKVDGNLDPMNLKDIRVRHLNGVQAAYWEMLHEGRITQTTANILMLSVEEAIDLASSEPLCDWKGLKANIHFPNYYKFLQLRMFPPKLVAYFTVERLESACYICAAFLRAHRIARRQLHNFIGDSNVASAVINESVIEGEEARKFLEDVHVTSPQILRDVKTRQAIYVVLNHLILYVQNLEKAGILEEKEMLHLHDAVQTDLKKLHRNPHLVKLPELSNIHPMLGALPSSIRELLASSIKERMKLGGLVLFEEGAKSSGIWLISNGVVKWESKMIRNKPPFHPTCMHGSTLGLYEVLTGRPYICDVITDSIVFCYFLEADKIISCLKSDPSMEDFLWKESAIFLSKLLLPQIFEKLAVQDIRALIAERSEITIYIGGESIKIPHHSVAFLLEGCVKTQGPQELVTAPAALLPSHGNQSFQSLAISGTEEASFTHQGSCYLVETRVRVIVFDIAAFEANAAREHSDLMSWPEHFYNQKHHKQSSERIGQHSRSLSARALQISIYGTKFVNGSC* 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4238 1020 Gene3D - 148 200 - -
Lja4g4238 1020 SUPERFAMILY cAMP-binding domain-like 729 849 IPR018490 -
Lja4g4238 1020 Pfam Sodium/hydrogen exchanger family 31 440 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lja4g4238 1020 Gene3D Jelly Rolls 725 856 IPR014710 -
Lja4g4238 1020 PANTHER - 21 965 - -
Lja4g4238 1020 PANTHER SODIUM/HYDROGEN EXCHANGER 21 965 IPR018422 GO:0006812|GO:0015299|GO:0016021
Lja4g4238 1020 ProSiteProfiles cAMP/cGMP binding motif profile. 731 826 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4238 Lja-Chr4 75916350 75931825 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4238 24 1013 Antiporters AT2G01980 63.271 0.0 1286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4238 - - gmx:100789429 1588.16