Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4237 ATGGCGGCGTTGACGGAATCGCTGCTTCCCCTCAGAATCATGGAGGAGCAGCCTCTTCCTTCTTCCGCTTCTGCTTCTGCTTCTGCTTCTGCTTCTGCCCCTTCTCCTTCTTCAGGTGCTGAATCCAACCCATCAGACTGCGTCATCTTCTTCGGTCTCTGCCTCGCTCTCGGAATCGCTTGCAGGCACCTCTTGCGTGGAACCAGAGTCCCTTACACTGCTGCGTTACTCATCATTGGCATTGCCCTTGGATCAATAGAATATGGTACTTCTCATCATCTGGGAAAGATTGGAGATGGAATTCGTCTTTGGTCAGATATTGATCCAGAACTTCTTTTAGCTGTTTTTCTCCCTGCTCTCCTTTTTGAGAGCTCATTCTCAATGGAAATTCACCAAATAAAGAGGTGTATGGCACAGATGATCTTACTAGCTGGTCCAGGTGTTGTGCTTTCAACCTTTTTTCTTGGAACTGCTTTGAAGCTTACTTTTCCATATAACTGGACATGGAAAACGTCACTTTTGCTTGGGGGACTTCTGAGTGCAACAGATCCTGTTGCTGTGGTGGCCTTGTTGAAAGAGCTCGGTGCTAGCAAAAAGCTAAGCACAATAATTGAAGGGGAATCCTTGATGAATGATGGGACGGCTATTGTGGTTTATACCCTTTTCTATCGGATGGTTCTTGGAGAGACCTTCAACTGGGTTGCTATAATCAAATTTCTTGCACAAGTTTCACTTGGAGCTGTAGGATTGGGTGTTGCTTTTGGTATAGCATCTGTTTTGTGGCTTGGGTTTATTTTTAATGACACGGTGATTGAGATTTCTCTAACAGTTGCTGTTAGCTACATTGCTTACTTCACTGCTCAAGAGGGTGCAGATGTTTCTGGTGTTTTGACAGTTATGTCATTGGGGATGTTCTATTCTGCATTTGCAAGGACAGCTTTTAAAGGTGAAAGCCAACAAAGCTTACATTACTTTTGGGAAATGGTTGCTTATATTGCTAATACCTTAATTTTCATTCTGAGTGGAGTTCTTATAGCTGAAGGGGTGCTTAAAGAAGAAAATGCTTTTCATCATGGAAAATCATGGATCTACCTCTTGGTTCTCTATGCTTATGTCCAGGTGTCTCGATGCATTGTAGTTGGAGCATTATTTCCTTTTCTAAGATATTTTGGATATGGTTTGGATTGGAAAGAAGCTATTATTCTCGTCTGGTCAGGATTACGAGGGGCAGTTGCCCTGTCACTTTCACTTTCAGTTAAGCGTTCGGGTGGAGAATCTGCTGAACTGACTTCAGAGATAGGAACGATGTTTCTTTTCTTCACTGGTGGAATTGTTTTTTTAACACTTATAGTGAATGGTTCAACTACACAGTTCATTTTACACTTCCTTGACATGGATAAGTTATCAGCAGCAAAGAGACGTATCCTTGATTTTACGAAGTATGAAATGTTGAACAAAGCATTAGAGGCTTTTGGTGAACTTGGAGATGATGAGGAACTTGGACCAGCTGACTGGCCCACAGTGAAGAGATATATCTCCTGTTTAAATGACACGGAAGGTGAACATGTGCACCCTCATGGTCCGTCTGAAGGTGATGGTAACATGGATCCTATGAATTTGAAAGACATACGAGTACGCATTCTGAATGGTGTCCAAGCGGCTTACTGGGAGATGCTTGATGAAGGAAGAATTACTACAACAACAGCTAATATTCTTATGCTATCAGTGGAAGAAGCAATAGATTTAGCTTCTTCTAAGCCTCTCTGTGACTGGGAAGGCTTAAAAGCTAATGTACACTTCCCAAACTACTACAAGTTCCTCCAATCTAGTATGCTCCCATCTAAGTTAGTTACCTACTTCACTGTGGAAAGGTTGGAATCTGCATGTTATATTTGTGCTGCATTTCTTCGTGCCCACAGAATTGCTAGACAACAATTGCGTGACTTCATAGGTGACAGTGATGTTGCTTATGCTGTTATCAATGAAAGTATTGTAGAAGGAGAAGAAGCACGAAAGTTCCTAGAAGATGTTCATGTAACATACCCTCAGGTTTTGCGTGTTGTAAAAACAAGGCAAGCAACATATGTAGTTCTAAACCATTTAATGGAGTACGTTCAAAACCTTGAGAAGGCTGGGATATTGGAAGAGAAAGAGATGCTACATCTTCATGATGCTGTCCAGACTGATTTGAAGAAACTACTTAGAAATCCTCCTTTGGTTAAGCTTCCTAAAATAAGTAACATACATCCTATGTTGGGTGCTCTGCCATCTTCGATTCGTGAATCACTTGCAAGCAATACCAAGCAAGTTATGAAATTGCGGGGTTTGACACTTTACAAGGAAGGTGCCAAATCAAATGGTATTTGGTTAATTTCTAATGGAGTGGTGAAGTGGGAAAGCAAGATGATCAGAACCAAGCACCCTTTTTATCCTACTTTTACTCATGGGAGCACATTGGGTCTTTATGAAGTTCTGACTAGAAGACCATATATATGCAATGTCATCACAGATTCCATCGTGTTCTGCTATTTTCTTGAAGCTGATAAAATAATTTCAATGCTCAACTCAGACCCTTCATTGGAAAACTTCCTGTGGCAAGAAAGTGCTATTTTCCTTTCCAAACTACTGTTTCCCCAGAAATTTGAAAAACTAGCTATGCAAGATCTAAGAGCTCTTATTGCTGAAAGATCGGAAATGACCATATACATAAGAGGGGAAACAATAGAAATCCCTCACCATTCAGTTGCCTTCTTACTGGAAGGATATGTGAAAACTCAAGGTCGACAAGAACTGGTAACTGCACCAGCAACCCTGCTTCCTTCACATGGGAATCAAAGCTTCCAAAACTTGGCAATTTCGGGTACTGAGGAAGCTAGTTTTACTCATCAAGGATCTTGTTATCTAGTCGAAACTAGAGCAAGGGTAATCGTGTTTGATATGACAGCATTTGAGGCTGATGCTGCTCTTGTCAGAAGGTCAAGTTCCCGGTTATCACCTGCCGTGGATCATTCCCATAGATCATTCCGTAGAGAACACAGTGGTCTCATGAGTTGGCCTGAACATTTCTTTAATCAGAAGCGCCATAAGCAGAGTGCTGAAGGGGTTGGGCAACAAACCATTAGTTTGTCTGAAAAGGCAATGCAGCTGAGCATTTACGGGAGCATGGTGAACATCCCACTCCAGAGAAGAAGTTTGTCGATGAATCGTGCTAGACCACCACCACCTCAGAGTCTGTCGTATCCAAACATGGCGTCGTATCAAGACCGTCCGCTTACTTCGGTCAAATCAGAAGGTGCTGCAACTGACAAGAAGGGTCATCAAGTGACACGGTTCAACCAAGATGTTACAAATCCCCCTCCACAAAGCACAGAGCGTAGAGAGCATCACAGAGATGATTCAAGTGATGATTCTGCTGTTGAAGAAGATATTATCGTGAGGGTTGATTCACCAAGCACGCTATCTTTCCCCCATTTATGA 3477 0.4222 MAALTESLLPLRIMEEQPLPSSASASASASASAPSPSSGAESNPSDCVIFFGLCLALGIACRHLLRGTRVPYTAALLIIGIALGSIEYGTSHHLGKIGDGIRLWSDIDPELLLAVFLPALLFESSFSMEIHQIKRCMAQMILLAGPGVVLSTFFLGTALKLTFPYNWTWKTSLLLGGLLSATDPVAVVALLKELGASKKLSTIIEGESLMNDGTAIVVYTLFYRMVLGETFNWVAIIKFLAQVSLGAVGLGVAFGIASVLWLGFIFNDTVIEISLTVAVSYIAYFTAQEGADVSGVLTVMSLGMFYSAFARTAFKGESQQSLHYFWEMVAYIANTLIFILSGVLIAEGVLKEENAFHHGKSWIYLLVLYAYVQVSRCIVVGALFPFLRYFGYGLDWKEAIILVWSGLRGAVALSLSLSVKRSGGESAELTSEIGTMFLFFTGGIVFLTLIVNGSTTQFILHFLDMDKLSAAKRRILDFTKYEMLNKALEAFGELGDDEELGPADWPTVKRYISCLNDTEGEHVHPHGPSEGDGNMDPMNLKDIRVRILNGVQAAYWEMLDEGRITTTTANILMLSVEEAIDLASSKPLCDWEGLKANVHFPNYYKFLQSSMLPSKLVTYFTVERLESACYICAAFLRAHRIARQQLRDFIGDSDVAYAVINESIVEGEEARKFLEDVHVTYPQVLRVVKTRQATYVVLNHLMEYVQNLEKAGILEEKEMLHLHDAVQTDLKKLLRNPPLVKLPKISNIHPMLGALPSSIRESLASNTKQVMKLRGLTLYKEGAKSNGIWLISNGVVKWESKMIRTKHPFYPTFTHGSTLGLYEVLTRRPYICNVITDSIVFCYFLEADKIISMLNSDPSLENFLWQESAIFLSKLLFPQKFEKLAMQDLRALIAERSEMTIYIRGETIEIPHHSVAFLLEGYVKTQGRQELVTAPATLLPSHGNQSFQNLAISGTEEASFTHQGSCYLVETRARVIVFDMTAFEADAALVRRSSSRLSPAVDHSHRSFRREHSGLMSWPEHFFNQKRHKQSAEGVGQQTISLSEKAMQLSIYGSMVNIPLQRRSLSMNRARPPPPQSLSYPNMASYQDRPLTSVKSEGAATDKKGHQVTRFNQDVTNPPPQSTERREHHRDDSSDDSAVEEDIIVRVDSPSTLSFPHL* 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4237 1158 MobiDBLite consensus disorder prediction 1093 1158 - -
Lja4g4237 1158 PANTHER SODIUM/HYDROGEN EXCHANGER 41 985 IPR018422 GO:0006812|GO:0015299|GO:0016021
Lja4g4237 1158 ProSiteProfiles cAMP/cGMP binding motif profile. 751 854 IPR000595 -
Lja4g4237 1158 SUPERFAMILY cAMP-binding domain-like 749 869 IPR018490 -
Lja4g4237 1158 Pfam Sodium/hydrogen exchanger family 51 460 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Lja4g4237 1158 MobiDBLite consensus disorder prediction 1065 1084 - -
Lja4g4237 1158 Gene3D - 168 220 - -
Lja4g4237 1158 PANTHER - 41 985 - -
Lja4g4237 1158 MobiDBLite consensus disorder prediction 1121 1143 - -
Lja4g4237 1158 Gene3D Jelly Rolls 745 876 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4237 Lja-Chr4 75895992 75913835 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4237 44 1155 Antiporters AT2G01980 63.491 0.0 1395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4237 - - gmx:100789429 1826.22