Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4236 ATGAACAACAACGCCCACCGTTCACCGCCAAACGACGTCGTCGTCAACCTCAATGTCGACTCTGCAACTCCCAACAATGTCACGGGGAACAACAAGAAGATGATCAAGGAGAAAAGGGACACGTTGATTCTCGCCTACAGGACACTGGGTGTGGTGTTCGGAGGTCTCGTGACATCGCCGCTTTACGTCTACCCTTCAATGCCGCTACACTCTCCGACGGAAGAGGACTATTTGGGAATCTACAGCATCATTTTCTGGACTCTCACTCTCATTGGGGTTGTCAAGTACGCCAACATTGCCATCAAAGCTGATGATCACGGCGAAGGTGGTACTTTTGCTGTTTACTCCTTGCTTTGCAGGCATTTCAATATTGGAATTTTGCCTTCTAAGCAGCAGCAACAGCAACAGCAACTCGGGTTGAACTCAATGACTCGGGGAACGGAGACTCATACTTGGCTTGCTAAGTTGTTTGAGAGAAGTGTGGTTGCTAGGAGGGTCTTGCTTTTTGTTGCCATGTTGGGTACTTGCATGCTTATTGGTGATGGTATACTTACCCCTGCAATTTCAGTGTTGTCAGCAATGGATGGAGTAAGAGCACCTTTTCCTAAAGTTAGCAAATCACTAGTGGAAGCACTCTCGGCAGTTGTCTTGATCTTTCTGTTCTTGTTGCAAAAATATGGCACATCCCGTGTAAGTTTCCTCTTTTCCCCAATAATGGGTGCGTGGACCCTCAGTACCCCACTTGTAGGAATTTACAGCATCATACACCACTATCCAAGTATATTCAAGGCTTTATCTCCGCACTACATTTTCCGCTTCTTTTTGAGAAATGGAAAATCTGGGTGGCTTCTGCTTGGTGGTATTGTCCTTTGCATTACAGGTTCTGAGGCAATGTTTGCTGATCTTGGTCATTTCAATCCGCGATCCATTCAGATAGCGTTTTTATTCACAATCTACCCATCCTTAGTTCTTACTTATGCGGGACAGACAGCATATCTGATAAAGCATCCCAACGATCATGATGATGGCTTTTACAAATTTATACCAAAGCCAGTCTACTGGCCTATATTCACCATTGCAACATTGGCTGCTGTTGTTGCTAGCCAGTCATTAATATCAGCCACCTTTTCTGTAATCAAGCAATCTGTAGTGCTGGATTATTTTCCTCGGGTAAAGATTATACACACATCTCATAATAAAGAAGGAGAGGTTTACTCCCCTGAAGTGAACTACATCCTTATGGTCCTTTGCGTTGCTGTCATACTTATTTTTGGAGATGGAAAAGATATTGGAAATGCTTTCGGTGTTGTTGTGAGCCTTGTGATGCTTATCACCACTATATTACTTACATTGGTCATGATCATGATATGGAGAACTCCTGCCATACTGGTTTCCCTGTACTTCGTAGTGTTTTTTGTGATGGAAGGAGTTTATGTCAGTGCTGTTTTCACCAAAATTGCTGAAGGTGGATGGATTCCTTTTGCCATATCATTCATCCTTGCTTTCATCATGTTCGGTTGGTTTTATGGTAGACAGAGAAAAATAGACTATGAGGTAACCCACAAGGTAACCTTTGAGAGACTTCAAGAGCTTTTATCTGACTGCAGTGTTCAAAGGGTACCTGGGCTGTGCTTCTTTTACACTAACATTCAAGATGGTCTCACTCCAATTCTTGGACACTACATAAAGAACATGAAATCCCTTCACAAGGTCACAATATTCACAACACTTCGGTATTTGCTAGTCCCCAAGGTTGCTCCACATGAGAGAATTGTGATCAAGAAAACAAACCTCAAAGGGGTATATTGTTGTGTGATTCAGTATGGGTATGCAGATACTCCAACCATAGCAAGAGATGATTTTGTGGATCAAGTCATTAATAGTTTGACCACACATATACAGAACTGCTCTGATAATGGTTCATTTGATTCTCACGAGATTGAAGAACAGGTTTCCAGTTTAGAAGAAGCGCGGTGTTCTGGGGTTGTTCATGTTCGTGGCAAGACAAGATTCTATGTTGGCCTGAACTGTGGCTGGTTTGATAAAATCATGCTTGGTTTTTATGAAATCATGCACAGTAACTGCAGATCTGGCCTGCCTGCTCTCGGGGTTTCACTACAGCACCGGATTGAGGTTGGAATGCTTTATGAGGCTTGA 2157 0.4312 MNNNAHRSPPNDVVVNLNVDSATPNNVTGNNKKMIKEKRDTLILAYRTLGVVFGGLVTSPLYVYPSMPLHSPTEEDYLGIYSIIFWTLTLIGVVKYANIAIKADDHGEGGTFAVYSLLCRHFNIGILPSKQQQQQQQLGLNSMTRGTETHTWLAKLFERSVVARRVLLFVAMLGTCMLIGDGILTPAISVLSAMDGVRAPFPKVSKSLVEALSAVVLIFLFLLQKYGTSRVSFLFSPIMGAWTLSTPLVGIYSIIHHYPSIFKALSPHYIFRFFLRNGKSGWLLLGGIVLCITGSEAMFADLGHFNPRSIQIAFLFTIYPSLVLTYAGQTAYLIKHPNDHDDGFYKFIPKPVYWPIFTIATLAAVVASQSLISATFSVIKQSVVLDYFPRVKIIHTSHNKEGEVYSPEVNYILMVLCVAVILIFGDGKDIGNAFGVVVSLVMLITTILLTLVMIMIWRTPAILVSLYFVVFFVMEGVYVSAVFTKIAEGGWIPFAISFILAFIMFGWFYGRQRKIDYEVTHKVTFERLQELLSDCSVQRVPGLCFFYTNIQDGLTPILGHYIKNMKSLHKVTIFTTLRYLLVPKVAPHERIVIKKTNLKGVYCCVIQYGYADTPTIARDDFVDQVINSLTTHIQNCSDNGSFDSHEIEEQVSSLEEARCSGVVHVRGKTRFYVGLNCGWFDKIMLGFYEIMHSNCRSGLPALGVSLQHRIEVGMLYEA* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4236 718 TIGRFAM kup: potassium uptake protein 44 717 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lja4g4236 718 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 36 717 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lja4g4236 718 Pfam K+ potassium transporter 46 612 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lja4g4236 718 PANTHER POTASSIUM TRANSPORTER 17-RELATED 36 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4236 Lja-Chr4 75888464 75892937 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4236 42 635 Inorganic Solute Cotransporters AT5G14880 45.617 4.01e-175 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4236 K03549 - gmx:100783944 1172.15