Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4221 ATGGCCAACAGAGTTCAAATTCCTACCAACAAATCGTCACTTATCGCCATGATTGCAGATGAGGATACTATAGTTGGCTTTCTGCTGGCTGGTGTGGGAAATGTTGACATACGTCGGAAGACGAATTACCTTATTGTGGATTCAAAAACAACTGTCAAACAAATCGAGGATGCATTCAAAGAATTCACAACAAGGGATGATATTGCAATTGTGCTGATTAGTCAATATGTTGCAAACATGGTAAGGTTTTTAGTTGATAGTTATAACAAGCCTGTTCCTGCAATACTTGAAATCCCTTCGAAAGATCACCCATATGATCCTGCACATGATTCAGTTCTTTCACGAGTAAAGTATCTCTTTTCTGCCGAATCAGTGGCATCTGACAGACGCTAA 393 0.3969 MANRVQIPTNKSSLIAMIADEDTIVGFLLAGVGNVDIRRKTNYLIVDSKTTVKQIEDAFKEFTTRDDIAIVLISQYVANMVRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLFSAESVASDRR* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4221 130 Pfam ATP synthase (F/14-kDa) subunit 15 116 IPR008218 GO:0034220|GO:0046961
Lja4g4221 130 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT F 1 130 - -
Lja4g4221 130 PIRSF V-ATP_synth_F 3 123 IPR005772 GO:0033180|GO:0046961|GO:1902600
Lja4g4221 130 Gene3D ATPase, V1 complex, subunit F 9 122 IPR036906 GO:0034220
Lja4g4221 130 PANTHER V-TYPE PROTON ATPASE SUBUNIT F 1 130 - -
Lja4g4221 130 SUPERFAMILY AtpF-like 15 99 IPR036906 GO:0034220
Lja4g4221 130 TIGRFAM V_ATP_synt_F: V-type ATPase, F subunit 10 124 IPR005772 GO:0033180|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4221 Lja-Chr4 75673106 75681237 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4221 1 126 Primary Pumps ATPases(2) AT4G02620 86.508 7.42e-81 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4221 K02151 - mnt:112090832 243.047