Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4213 ATGTCTAATTCTCTCTTCTCATTGCTCATTCTTTTGCTTCCTTGCACTATTTTAGCCTCACCACATTCTCCTGAAGATTTTGATGAGCCAATCACTTCCTTCCCAGGGGAAACCATTTACACTCTCAAAGTTCCAACATTAGAGGAAAACAACTTCGATAATCTCCTATCCTTTGGTCACTACCAAAAAAGCTGTCCACAATTTGAATCCATCCTAAACAGGAAAGTGCAAGAATGGATTCATAAGGATTACACTTTAGCAGCTAGTCTCCTAAGGTTACATTTCCATGATTGCTCAATCAGGGGATGTGATGCTTCTATTCTTTTGAACCATGATGGAAGTGAGAGGTCAGCACAGGCAAGCAAGACACTGAGAGGATTTGATGTGATTGATGATATTAAGGCAGAGCTGGAGAAGCATTGCCCAAAAACAGTTTCTTGTGCAGACATTCTGACTGCTGCTACCAGGGATGCCACTGTTAAGTTGGGTGGTCCATATTGGCCAGTTCCTTATGGAAGGAAAGATGGGTTGGTCTCCATTGCCAAGGAAGCTGAAATGGTGCCTATGGGTCATGAAAACATTACTTCCTTGGTTGAGTTTTTCCAATCCAAGGGCCTAAATGTGCTTGACTTGGTGGTTCTTTCAGGGGCTCATACTATTGGAAGGGCTTCATGTGGATCAATTCAATATAGACTATACAATTACAATGGAACTGGGAAACCTGACCCTTCCATAGCTCCCAAGTACCTCAACTTCTTGCAAAGAAAGTGTAGATGGGCCTCAGAGTATGTTGATCTTGATGCTACTACTCCAAGAGCCTTTGATCCTGTATACTACATCAATCTCAAGAAGAAGATGGGATTGTTATCCACAGATCAGTTGTTGTATTCTGATCCAAGGACTTCTCCTATTGTTTCTGCATTTGCTGGTGCCCCTTACGTTTTCACACACCAGTTTGCAGTGTCCATGGCAAAGCTTGGCGATGTTGAAGTTCTCACGGGGGAAGATGAAGGGGAAATCAGGACCAACTGTAATGCCATCAATGCTTATTGA 1053 0.4274 MSNSLFSLLILLLPCTILASPHSPEDFDEPITSFPGETIYTLKVPTLEENNFDNLLSFGHYQKSCPQFESILNRKVQEWIHKDYTLAASLLRLHFHDCSIRGCDASILLNHDGSERSAQASKTLRGFDVIDDIKAELEKHCPKTVSCADILTAATRDATVKLGGPYWPVPYGRKDGLVSIAKEAEMVPMGHENITSLVEFFQSKGLNVLDLVVLSGAHTIGRASCGSIQYRLYNYNGTGKPDPSIAPKYLNFLQRKCRWASEYVDLDATTPRAFDPVYYINLKKKMGLLSTDQLLYSDPRTSPIVSAFAGAPYVFTHQFAVSMAKLGDVEVLTGEDEGEIRTNCNAINAY* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4213 350 ProSiteProfiles Plant heme peroxidase family profile. 55 348 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g4213 350 ProSitePatterns Peroxidases proximal heme-ligand signature. 210 220 IPR019793 -
Lja4g4213 350 SUPERFAMILY Heme-dependent peroxidases 56 348 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lja4g4213 350 PANTHER PEROXIDASE 49 347 - -
Lja4g4213 350 Gene3D - 59 348 - -
Lja4g4213 350 Gene3D Peroxidase, domain 2 188 326 - -
Lja4g4213 350 PRINTS Haem peroxidase superfamily signature 145 162 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g4213 350 PRINTS Haem peroxidase superfamily signature 87 101 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g4213 350 PRINTS Haem peroxidase superfamily signature 210 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g4213 350 PRINTS Haem peroxidase superfamily signature 267 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g4213 350 PRINTS Haem peroxidase superfamily signature 163 175 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lja4g4213 350 CDD secretory_peroxidase 56 347 IPR033905 GO:0004601|GO:0042744
Lja4g4213 350 ProSitePatterns Peroxidases active site signature. 87 98 IPR019794 GO:0004601
Lja4g4213 350 PRINTS Plant peroxidase signature 163 178 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4213 350 PRINTS Plant peroxidase signature 65 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4213 350 PRINTS Plant peroxidase signature 144 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4213 350 PRINTS Plant peroxidase signature 209 221 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4213 350 PRINTS Plant peroxidase signature 281 298 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4213 350 PRINTS Plant peroxidase signature 265 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4213 350 PRINTS Plant peroxidase signature 89 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4213 350 PRINTS Plant peroxidase signature 321 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4213 350 PRINTS Plant peroxidase signature 125 138 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4213 350 PANTHER PEROXIDASE 25-RELATED 49 347 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lja4g4213 350 Pfam Peroxidase 74 309 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4213 Lja-Chr4 75559581 75561343 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4213 52 349 Peroxidase AT1G30870 62.667 1.23e-136 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4213 K00430 - gmx:100798229 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g4213 4 75559581 75561343 Lja4g4213 4 75559581 75561343 ECH