Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4211 ATGAGTTCACTAGCACCATTTTCAGCAACTGGAACATGCCTCACTTCCCTGCATCCCCTTAACAATTCATCACCGCCAAAACCACCACCTCTGACTCTGACTCCTATAAAATGTGCTGCTACCCAACTCCAACCGCCAGTAACAGCTCAAAAAGAGAGCCAGTTCAAGAGAAGAGACGCTATAGGCCTTGCCTTGAGTGTTGGCATTCTTCAAGCTTTCTTTCCACCAAAACCAGCTTCAGCAGCAGTGGAAGCACCACCGTGTGAATTAACAGCAGCTCCTTCTGGCCTCGCTTTCTGTGATAAGCTTGTTGGCACGGGTCCTCAAGCTGTTAAGGGACAACTCATCAAGGCACATTATGTAGGGAGATTGGAGAATGGGAAAATTTTCGACAGCAGCTATAATCGTGGCCAGCCACTCACATTTCGCGTCGGTGTTGGAGAGGTCATCAAAGGATGGGATGAAGGCATTATAGGAGGTGATGGAATTCCACCCATGCTTGCAGGAGGCAAACGTACACTGAAGCTTCCTCCAGAACTTGCATATGGTTCAAGAGGAGCTGGTTGTAGAGGAGGTTCGTGTGTCATTCCTCCTGATTCGGTACTCTTATTTGATGTGGAGTTTGTTAGCAAAGTATGA 639 0.4773 MSSLAPFSATGTCLTSLHPLNNSSPPKPPPLTLTPIKCAATQLQPPVTAQKESQFKRRDAIGLALSVGILQAFFPPKPASAAVEAPPCELTAAPSGLAFCDKLVGTGPQAVKGQLIKAHYVGRLENGKIFDSSYNRGQPLTFRVGVGEVIKGWDEGIIGGDGIPPMLAGGKRTLKLPPELAYGSRGAGCRGGSCVIPPDSVLLFDVEFVSKV* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4211 212 PANTHER - 46 211 IPR044609 GO:0000413|GO:0003755|GO:0061077
Lja4g4211 212 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP13, CHLOROPLASTIC 46 211 - -
Lja4g4211 212 Gene3D - 85 211 IPR046357 GO:0003755
Lja4g4211 212 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 113 212 IPR001179 GO:0003755
Lja4g4211 212 SUPERFAMILY FKBP-like 91 210 - -
Lja4g4211 212 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 108 208 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4211 Lja-Chr4 75552765 75555921 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja4g4211 113 210 Calmodulin-binding Proteins AT5G48570 42.857 8.82e-17 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4211 K01802 - pvy:116141309 246.128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja4g4211 4 75552765 75555921 Lja4g4211 4 75552765 75555921 ECH