Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja4g4199 ATGGAGAATGAAAGGGAAGATGGTTGGAGAAATTGGGCCAGTGATGAGGTTGTTGAAGAGAGCGAGATCGAGATCGAGTCGGTAAGAGATTTTACAACAGGGACAGTGGAAAATGGTAGTGAAACGTGCTTGGAAGGCATGTTCATCTCTGATGAAGACGGAGTTTTTGAAAATGAGGCTGGAATTTATGAAGATTACGTTGATGAGGAATCGTTTGTGGACTTTGAAAACGAGTGTCATTTCGATACAGATGAAGATGTTTTGCATGAAGATGATGAGGATGAGCAGCATAGAGAAGAGTCAGTGGAACCAAATCTTGTAGCTATCAACAGTAAAGAAGACTATTTGCAGTTAGATTTCAGTTGTGTAGACCCTGTTGAAGTGACGAAGTTTCATTTTGCAAATGTGGAGCTTGCTTATGATTTCTACCACTGGTATGGAAGAATCATGGGTTTTTCTGCCCGTAGAGGAACCATACGCAGAAATAGAAAAGGGGAAGCTGTCCAGCAAACCTTTTTGTGCCACCGACAAGGATTTCGTGAAGAGAAGGGAATTTGTGATGAAATGAGATTGAGACGACAAAAGGAAAAAATTGCTCATGAGATACATGTATTAAAAGGCAATTCTGCAACAGAGGATGAGGATGACAACAACTTTGATGCCACTGCTGCTGGTTTGGGGAATGTTAATAACACGGGACCTGTTAGGAGGCCTCGAGTTCATGCAAGAGCGTCATCTTCGGGATTAACTACCAAGCGTACAATTAGATGCACCGCGTGCAAGGTCGCTGGGCACAACAGATTGACATGTCCTTTGTTAAGAGACATTGAGTATGAAAATCGCAGCTTTGAAAGGGATGACGAGAATGAAAATGGTTCTTATTAG 885 0.4215 MENEREDGWRNWASDEVVEESEIEIESVRDFTTGTVENGSETCLEGMFISDEDGVFENEAGIYEDYVDEESFVDFENECHFDTDEDVLHEDDEDEQHREESVEPNLVAINSKEDYLQLDFSCVDPVEVTKFHFANVELAYDFYHWYGRIMGFSARRGTIRRNRKGEAVQQTFLCHRQGFREEKGICDEMRLRRQKEKIAHEIHVLKGNSATEDEDDNNFDATAAGLGNVNNTGPVRRPRVHARASSSGLTTKRTIRCTACKVAGHNRLTCPLLRDIEYENRSFERDDENENGSY* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja4g4199 294 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 80 187 - -
Lja4g4199 294 MobiDBLite consensus disorder prediction 223 247 - -
Lja4g4199 294 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 80 187 - -
Lja4g4199 294 Pfam FAR1 DNA-binding domain 141 198 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja4g4199 Lja-Chr4 75464468 75467410 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lja4g4199 FAR1 5e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja4g4199 - K17604 mtr:MTR_1g070355 98.9821